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BaseInfo

ncRNA ID novel_gma_miR5980
Species Glycine max
Class miRNA
Genome position Chr17:9535639-9535709 [-]
Reference genome Glycine_max_v2.0
Source SRR835768
Length 24
Mature sequence(if miRNA) 1 - ACCAAUGCGGGCUUAUGCGGGCGG - 24
Stem-loop(if miRNA) --      U   -      -G   CCA   A      U
  GUCCGU UGA CCCGCG  GGU   GGC GACCAA U
  |||||| ||| ||||||  |||   ||| ||||||
  CGGGCG AUU GGGCGU  CCA   UCG CUGGUU U
GG      U   C      AA   ---   C      A
Stem-loop sequence GUCCGUUUGACCCGCGGGGUCCAGGCAGACCAAUUUAUUGGUCCGCUACCAAUGCGGGCUUAUGCGGGCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774579.1
ncRNA:24   GGCGGGCGUAUUCGGGCGUAACCA   1
  ==|||||||||||=||||||||||
targets:1084   UUGCCCGCAUAAGUCCGCAUUGGU   1107

1.5 PREDICTED: Glycine max uncharacterized LOC100805956 (LOC100805956), transcript variant X1, mRNA uncharacterized LOC100805956(LOC100805956) coding protein psRNATarget