ncRNA ID | novel_gma_miR5974 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:17521913-17522026 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835768 |
Length | 24 |
Mature sequence(if miRNA) | 91 - AAUAGAACCUACCCGAUGUCGGCU - 114 |
Stem-loop(if miRNA) |
--      C   C    A   UUUCGAA             -----------    -  UUUU   CCGACA CGG UAGG UCU       CGACAUUGACCAA           GGCU AC    A   |||||| ||| |||| |||       |||||||||||||           |||| ||    G   GGCUGU GCC AUCC AGA       GCUGUAGCUGGUU           CCGA UG    U UC      A   C    A   -UAACCA             UGAUAAAAAAA    C  CAAC |
Stem-loop sequence | CCGACACCGGCUAGGAUCUUUUCGAACGACAUUGACCAAGGCUACUUUUAGUCAACGUCAGCCAAAAAAAUAGUUUGGUCGAUGUCGACCAAUAGAACCUACCCGAUGUCGGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003540848.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100799220 (LOC100799220), mRNA | uncharacterized LOC100799220(LOC100799220) | coding protein | psRNATarget |