ncRNA ID | novel_gma_miR5972 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:991263-991474 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295518;SRR1295527 |
Length | 24 |
Mature sequence(if miRNA) | 189 - AUAUCGAGGACUCAAAAUAAAAAU - 212 |
Stem-loop(if miRNA) |
--      --              UUUUUUAUUUUAAAUUUUUUAUAUAUU              A      -AAC       U          UA         CAA    -UCUUU  A   UUUUGU  UGAGUUUUUGAUAU                           AAAAGUUUUGUUUU GAUUUC    AUCAGUU AGUGAUGAUG  GCAUCAUCU   UAAC      CA U   ||||||  ||||||||||||||                           |||||||||||||| ||||||    ||||||| ||||||||||  |||||||||   ||||      || A   AAAAUA  ACUCAGGAGCUAUA                           UUUUCAAAAUAAAA CUAGAG    UAGUCAA UCACUACUAC  UGUAGUAGA   AUUG      GU U UA      AA              ------------------------UUC              C      CUAA       U          GC         ---    CUAAUU  A |
Stem-loop sequence | UUUUGUUGAGUUUUUGAUAUUUUUUUAUUUUAAAUUUUUUAUAUAUUAAAAGUUUUGUUUUAGAUUUCAACAUCAGUUUAGUGAUGAUGUAGCAUCAUCUCAAUAACUCUUUCAAUAUAUGUUAAUCGUUAAGAUGAUGUCGCAUCAUCACUUAACUGAUAAUCGAGAUCCAAAAUAAAACUUUUCUUAUAUCGAGGACUCAAAAUAAAAAU |