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BaseInfo

ncRNA ID novel_gma_miR5972
Species Glycine max
Class miRNA
Genome position Chr20:991263-991474 [+]
Reference genome Glycine_max_v2.0
Source SRR1295518;SRR1295527
Length 24
Mature sequence(if miRNA) 189 - AUAUCGAGGACUCAAAAUAAAAAU - 212
Stem-loop(if miRNA) --      --              UUUUUUAUUUUAAAUUUUUUAUAUAUU              A      -AAC       U          UA         CAA    -UCUUU  A
  UUUUGU  UGAGUUUUUGAUAU                           AAAAGUUUUGUUUU GAUUUC    AUCAGUU AGUGAUGAUG  GCAUCAUCU   UAAC      CA U
  ||||||  ||||||||||||||                           |||||||||||||| ||||||    ||||||| ||||||||||  |||||||||   ||||      || A
  AAAAUA  ACUCAGGAGCUAUA                           UUUUCAAAAUAAAA CUAGAG    UAGUCAA UCACUACUAC  UGUAGUAGA   AUUG      GU U
UA      AA              ------------------------UUC              C      CUAA       U          GC         ---    CUAAUU  A
Stem-loop sequence UUUUGUUGAGUUUUUGAUAUUUUUUUAUUUUAAAUUUUUUAUAUAUUAAAAGUUUUGUUUUAGAUUUCAACAUCAGUUUAGUGAUGAUGUAGCAUCAUCUCAAUAACUCUUUCAAUAUAUGUUAAUCGUUAAGAUGAUGUCGCAUCAUCACUUAACUGAUAAUCGAGAUCCAAAAUAAAACUUUUCUUAUAUCGAGGACUCAAAAUAAAAAU