Search result

BaseInfo

ncRNA ID novel_gma_miR5964
Species Glycine max
Class miRNA
Genome position Chr1:48245906-48246017 [+]
Reference genome Glycine_max_v2.0
Source SRR835768;SRR835770
Length 24
Mature sequence(if miRNA) 1 - UUAAGUGAUGACGUGAUAGAUAGA - 24
Stem-loop(if miRNA) --           C         AG U  A  CA         A      -C   A
  UUAAGUGAUGA GUGAUAGAU  A UG CA  UCAUCACGU UUGUCA  GAC C
  ||||||||||| |||||||||  | || ||  ||||||||| ||||||  ||| C
  AAUUCACUACU CACUGUUUG  U AU GU  AGUAGUGCA AACAGU  CUG U
AU           A         CU C  A  AA         G      AA   C
Stem-loop sequence UUAAGUGAUGACGUGAUAGAUAGAUUGACACAUCAUCACGUAUUGUCACGACACCUCGUCAAUGACAAGACGUGAUGAAAUGAUACUUCGUUUGUCACAUCAUCACUUAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766262.1
ncRNA:24   AGAUAGAUAGUGCAGUAGUGAAUU   1
  |||=|=||||||||||||||||||
targets:760   UCUGUUUAUCACGUCAUCACUUAA   783

1.0 PREDICTED: Glycine max uncharacterized LOC100804377 (LOC100804377), mRNA uncharacterized LOC100804377(LOC100804377) coding protein psRNATarget