ncRNA ID | novel_gma_miR5962 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:5341934-5341992 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835767 |
Length | 21 |
Mature sequence(if miRNA) | 39 - UCUUAAAAUGGGCAGAUUUCU - 59 |
Stem-loop(if miRNA) |
--       G -   C           U     AAAUCUG U AUU UAAGACGGGUU GGA   ||||||| | ||| ||||||||||| ||U   UUUAGAC G UAA AUUCUGUCCAA CCA UC       G G   A           -   |
Stem-loop sequence | AAAUCUGGUAUUCUAAGACGGGUUUGGAUACCAACCUGUCUUAAAAUGGGCAGAUUUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014773264.1 |
|
1.5 | PREDICTED: Glycine max E3 ubiquitin-protein ligase CHIP-like (LOC100798587), mRNA | E3 ubiquitin-protein ligase CHIP-like(LOC100798587) | coding protein | psRNATarget |