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BaseInfo

ncRNA ID novel_gma_miR5962
Species Glycine max
Class miRNA
Genome position Chr3:5341934-5341992 [+]
Reference genome Glycine_max_v2.0
Source SRR835767
Length 21
Mature sequence(if miRNA) 39 - UCUUAAAAUGGGCAGAUUUCU - 59
Stem-loop(if miRNA) --       G -   C           U  
  AAAUCUG U AUU UAAGACGGGUU GGA
  ||||||| | ||| ||||||||||| ||U
  UUUAGAC G UAA AUUCUGUCCAA CCA
UC       G G   A           -  
Stem-loop sequence AAAUCUGGUAUUCUAAGACGGGUUUGGAUACCAACCUGUCUUAAAAUGGGCAGAUUUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773264.1
ncRNA:21   UCUUUAGACGGGUAAAAUUCU   1
  **|||||||||||||*|||||
targets:1167   UCAAAUCUGCCCAUUCUAAGA   1187

1.5 PREDICTED: Glycine max E3 ubiquitin-protein ligase CHIP-like (LOC100798587), mRNA E3 ubiquitin-protein ligase CHIP-like(LOC100798587) coding protein psRNATarget