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BaseInfo

ncRNA ID novel_gma_miR5960
Species Glycine max
Class miRNA
Genome position Chr3:36238935-36238997 [+]
Reference genome Glycine_max_v2.0
Source SRR835767
Length 24
Mature sequence(if miRNA) 1 - UUUUGGGAAUGUAAAUGAAGACGG - 24
Stem-loop(if miRNA) --     -      U    GA G        U
  UUUUG GGAAUG AAAU  A ACGGUUUU A
  ||||| |||||| ||||  | |||||||| A
  AAAAU CCUUAC UUUG  U UGCCAAAA A
UU     A      U    -A G        U
Stem-loop sequence UUUUGGGAAUGUAAAUGAAGACGGUUUUUAAAUAAAACCGUGUAGUUUUCAUUCCAUAAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003548989.3
ncRNA:24   GGCAGAAGUAAAUGUAAGGGUUUU   1
  *|*|=|||||||*||||||||||=
targets:154   ACAUUUUCAUUUUCAUUCCCAAAG   177

2.5 PREDICTED: Glycine max uncharacterized LOC100808528 (LOC100808528), mRNA uncharacterized LOC100808528(LOC100808528) coding protein psRNATarget