Search result

BaseInfo

ncRNA ID novel_gma_miR5959
Species Glycine max
Class miRNA
Genome position Chr3:1930252-1930310 [+]
Reference genome Glycine_max_v2.0
Source SRR835767
Length 24
Mature sequence(if miRNA) 36 - GUGGCACUAAAGGAUGACGUGACA - 59
Stem-loop(if miRNA) --UGAG    -A             -C  A
      GUCA  UUUUAGUGCCACG  GG C
      ||||  |||||||||||||  || U
      CAGU  GAAAUCACGGUGC  CC A
ACAGUG    AG             AA  U
Stem-loop sequence UGAGGUCAAUUUUAGUGCCACGCGGACUAUCCAACGUGGCACUAAAGGAUGACGUGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003538749.3
ncRNA:24   ACAGUGCAGUAGGAAAUCACGGUG   1
  |*|||||*|||*||||||||||||
targets:1443   UUUCACGCCAUACUUUAGUGCCAC   1466

2.5 PREDICTED: Glycine max subtilisin-like protease SBT1.7 (LOC100801866), mRNA subtilisin-like protease SBT1.7(LOC100801866) coding protein psRNATarget