ncRNA ID | novel_gma_miR5953 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:1277618-1277699 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835767 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CAUGAAAUAACAUAUAUGUAG - 21 |
Stem-loop(if miRNA) |
--      U           A  C       U  AU  AUU   ACGUAU UGUUGUUUCAU UC UAUAUGU UG  AA   G   |||||| ||||||||||| || ||||||| ||  ||   UGUAUA ACAAUAAAGUA AG AUAUGUA AC  UU   C GA      U           C  A       U  CU  CAU |
Stem-loop sequence | ACGUAUUUGUUGUUUCAUAUCCUAUAUGUUUGAUAAAUUGCUACUUUCCAUAUGUAUAAGACAUGAAAUAACAUAUAUGUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006588809.2 |
|
2.5 | PREDICTED: Glycine max BEL1-like homeodomain protein 1 (LOC100791773), transcript variant X1, mRNA | BEL1-like homeodomain protein 1(LOC100791773) | coding protein | psRNATarget | |||||||||
XM_003535767.3 |
|
2.5 | PREDICTED: Glycine max BEL1-like homeodomain protein 1 (LOC100791773), transcript variant X3, mRNA | BEL1-like homeodomain protein 1(LOC100791773) | coding protein | psRNATarget | |||||||||
XM_014763048.1 |
|
2.5 | PREDICTED: Glycine max BEL1-like homeodomain protein 1 (LOC100791773), transcript variant X2, mRNA | BEL1-like homeodomain protein 1(LOC100791773) | coding protein | psRNATarget |