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BaseInfo

ncRNA ID novel_gma_miR5942
Species Glycine max
Class miRNA
Genome position Chr19:48860195-48860392 [-]
Reference genome Glycine_max_v2.0
Source SRR835767
Length 24
Mature sequence(if miRNA) 1 - AAUAAUUUUGCUAGGACGAAAAAC - 24
Stem-loop(if miRNA) --          U           A        G              C              C  CA    GAU             A      UUCA
  UUUUUGUCCU GCAAAAUUAUU UUUUGUUU UAGUCCUUGCAAAU AUGUUUGUUUUGUU UU  UUCU   GGCGCUUUAGAUA CGUUUU    C
  |||||||||| ||||||||||| |||||||| |||||||||||||| |||||||||||||| ||  ||||   ||||||||||||| ||||||
  AAAAGCAGGA CGUUUUAAUAA AAAACAAA AUUAGGAAUGUUUA UACAAACAAAACAA AA  AAGA   UCGUGAAAUCUAU GCGAAA    A
CA          U           A        A              A              A  UC    AUU             C      CUUG
Stem-loop sequence UUUUUGUCCUUGCAAAAUUAUUAUUUUGUUUGUAGUCCUUGCAAAUCAUGUUUGUUUUGUUCUUCAUUCUGAUGGCGCUUUAGAUAACGUUUUUUCACAGUUCAAAGCGCUAUCUAAAGUGCUUUAAGAACUAAAAACAAAACAAACAUAAUUUGUAAGGAUUAAAAACAAAAAAAUAAUUUUGCUAGGACGAAAAAC