ncRNA ID | novel_gma_miR5931 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:57920690-57920803 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835767 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAAGAUCAAGUAGUUAACAUCGGU - 24 |
Stem-loop(if miRNA) |
--U           G     G         -AUU    -A               UAU    GAUGUUAACUA UUGAU UUAACAUCG    UUUA  AAAGUCGAUGUUAAC   A    ||||||||||| ||||| |||||||||    ||||  |||||||||||||||    CUACAAUUGAU AACUA AAUUGUAGC    AAAU  UUUUAGCUACAAUUG   U UGG           G     G         CAAU    AG               UAU |
Stem-loop sequence | UGAUGUUAACUAGUUGAUGUUAACAUCGAUUUUUAAAAAGUCGAUGUUAACUAUAUUAUGUUAACAUCGAUUUUGAUAAAUAACCGAUGUUAAGAUCAAGUAGUUAACAUCGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT094157.1 |
|
3.0 | Soybean clone JCVI-FLGm-24L19 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_014769928.1 |
|
3.0 | PREDICTED: Glycine max protein ESKIMO 1-like (LOC100785578), transcript variant X2, mRNA | protein ESKIMO 1-like(LOC100785578) | coding protein | psRNATarget | |||||||||
XM_014769926.1 |
|
3.0 | PREDICTED: Glycine max protein ESKIMO 1-like (LOC100785578), transcript variant X1, mRNA | protein ESKIMO 1-like(LOC100785578) | coding protein | psRNATarget |