Search result

BaseInfo

ncRNA ID	novel_gma_miR5928
Species	Glycine max
Class	miRNA
Genome position	Chr1:56788852-56788920 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835767
Length	24
Mature sequence(if miRNA)	1 - AGGUGUGACUGUCAGUGGAAGGCU - 24
Stem-loop(if miRNA)	AGGUGU     U  --        -  AAC     U       GACUG CA  GUGGAAGG CU   ACUAA U       ||||| ||  |||||||| ||   ||||| U       UUGAU GU  UAUCUUCU GA   UGAUU U AUUUUU     U  UC        U  ---     U
Stem-loop sequence	AGGUGUGACUGUCAGUGGAAGGCUAACACUAAUUUUUUUAGUAGUUCUUCUAUCUUGUUAGUUUUUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT095090.1	ncRNA:24   UCGGAAGGUGACUGUCAGUGUGGA   1   **||||||*||*|||||||||||| targets:68   CUCCUUCCUCUCACAGUCACACCU   91 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-19M11 unknown mRNA	NA	coding protein	psRNATarget
XM_003552981.3	ncRNA:24   UCGGAAGGUGACUGUCAGUGUGGA   1   **||||||*||*|||||||||||| targets:164   CUCCUUCCUCUCACAGUCACACCU   187 Target Full Sequence	2.5	PREDICTED: Glycine max 30S ribosomal protein S1 (LOC100798303), transcript variant X1, mRNA	30S ribosomal protein S1(LOC100798303)	coding protein	psRNATarget
XM_014771183.1	ncRNA:24   UCGGAAGGUGACUGUCAGUGUGGA   1   **||||||*||*|||||||||||| targets:163   CUCCUUCCUCUCACAGUCACACCU   186 Target Full Sequence	2.5	PREDICTED: Glycine max 30S ribosomal protein S1 (LOC100798303), transcript variant X2, mRNA	30S ribosomal protein S1(LOC100798303)	coding protein	psRNATarget