Search result

BaseInfo

ncRNA ID novel_gma_miR5926
Species Glycine max
Class miRNA
Genome position Chr18:15637500-15637561 [-]
Reference genome Glycine_max_v2.0
Source SRR835767
Length 21
Mature sequence(if miRNA) 1 - UUCUGAGAAGAACCAUUGAUA - 21
Stem-loop(if miRNA) --   -  A   UC     UC   --U     U
  UCA UG GUU  UUUUA  AGA   CAAAC C
  ||| || |||  |||||  |||   |||||
  AGU AC CAA  AGAGU  UCU   GUUUG A
AU   U  -   GA     CU   UCU     C
Stem-loop sequence UCAUGAGUUUCUUUUAUCAGAUCAAACUCACGUUUGUCUUCUUCUGAGAAGAACCAUUGAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014772868.1
ncRNA:21   AUAGUUACCAAGAAGAGUCUU   1
  *||||=||||||||||||*||
targets:74   AAUCAGUGGUUCUUCUCACAA   94

2.5 PREDICTED: Glycine max GATA transcription factor 8-like (LOC100816641), transcript variant X3, mRNA GATA transcription factor 8-like(LOC100816641) coding protein psRNATarget
XM_003547952.3
ncRNA:21   AUAGUUACCAAGAAGAGUCUU   1
  *=*|||||||||||||||*||
targets:126   AGGCAAUGGUUCUUCUCAUAA   146

2.5 PREDICTED: Glycine max uncharacterized calcium-binding protein At1g02270-like (LOC100788191), transcript variant X2, mRNA uncharacterized calcium-binding protein At1g02270-like(LOC100788191) coding protein psRNATarget
XM_006598796.2
ncRNA:21   AUAGUUACCAAGAAGAGUCUU   1
  *=*|||||||||||||||*||
targets:367   AGGCAAUGGUUCUUCUCAUAA   387

2.5 PREDICTED: Glycine max uncharacterized calcium-binding protein At1g02270-like (LOC100788191), transcript variant X1, mRNA uncharacterized calcium-binding protein At1g02270-like(LOC100788191) coding protein psRNATarget