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BaseInfo

ncRNA ID novel_gma_miR5907
Species Glycine max
Class miRNA
Genome position Chr15:19657097-19657301 [-]
Reference genome Glycine_max_v2.0
Source SRR835767
Length 24
Mature sequence(if miRNA) 182 - AUACGUGACGACAUUUUUGAAAAU - 205
Stem-loop(if miRNA) --       AC A       G                                              G   --------U   AUAAUCACACUAAAUCGAGCUGU
  AUACGUG  G CAUUUUU AAAAUAAAAUAUUUUUAUUAACAUCGGUUAUUUGAAAAUCGAUGUU UAA         GUG                       U
  |||||||  | ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||         |||                       A
  UAUGUAC  C GUAAAAA UUUUAUUUUAUAGAAAUAAUUGUAGUCAAUAAACUUUUGGCUACAA AUU         GUU                       A
AU       CA A       G                                              G   CAUAAAUCU   GUAGCUAAAAAUUUAUUGACUAC
Stem-loop sequence AUACGUGACGACAUUUUUGAAAAUAAAAUAUUUUUAUUAACAUCGGUUAUUUGAAAAUCGAUGUUGUAAUGUGAUAAUCACACUAAAUCGAGCUGUUAACAUCAGUUAUUUAAAAAUCGAUGUUGUCUAAAUACUUAGAACAUCGGUUUUCAAAUAACUGAUGUUAAUAAAGAUAUUUUAUUUUGAAAAAUGACACCAUGUAUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014777984.1
ncRNA:24   UAAAAGUUUUUACAGCAGUGCAUA   1
  |*||*|=||||||||*||||||||
targets:314   AAUUACGAAAAUGUCAUCACGUAU   337

2.5 PREDICTED: Glycine max tropinone reductase homolog (LOC100818477), mRNA tropinone reductase homolog(LOC100818477) coding protein psRNATarget