ncRNA ID | novel_gma_miR5907 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:19657097-19657301 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835767 |
Length | 24 |
Mature sequence(if miRNA) | 182 - AUACGUGACGACAUUUUUGAAAAU - 205 |
Stem-loop(if miRNA) |
--       AC A       G                                              G   --------U   AUAAUCACACUAAAUCGAGCUGU   AUACGUG  G CAUUUUU AAAAUAAAAUAUUUUUAUUAACAUCGGUUAUUUGAAAAUCGAUGUU UAA         GUG                       U   |||||||  | ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||         |||                       A   UAUGUAC  C GUAAAAA UUUUAUUUUAUAGAAAUAAUUGUAGUCAAUAAACUUUUGGCUACAA AUU         GUU                       A AU       CA A       G                                              G   CAUAAAUCU   GUAGCUAAAAAUUUAUUGACUAC |
Stem-loop sequence | AUACGUGACGACAUUUUUGAAAAUAAAAUAUUUUUAUUAACAUCGGUUAUUUGAAAAUCGAUGUUGUAAUGUGAUAAUCACACUAAAUCGAGCUGUUAACAUCAGUUAUUUAAAAAUCGAUGUUGUCUAAAUACUUAGAACAUCGGUUUUCAAAUAACUGAUGUUAAUAAAGAUAUUUUAUUUUGAAAAAUGACACCAUGUAUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014777984.1 |
|
2.5 | PREDICTED: Glycine max tropinone reductase homolog (LOC100818477), mRNA | tropinone reductase homolog(LOC100818477) | coding protein | psRNATarget |