ncRNA ID | novel_gma_miR5905 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:32510423-32510523 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835767 |
Length | 22 |
Mature sequence(if miRNA) | 80 - CUUGAGACAUACCUUUUAACUA - 101 |
Stem-loop(if miRNA) |
--UGC     U     AA     --    -GGG A               AUA      AGAAG UGUGU  CUCGA  GUUU    C CUGGUAAUCGAUUAC   C      ||||| |||||  |||||  ||||    | |||||||||||||||      UUUUC AUACA  GAGUU  CAAA    G GACCAUUAGCUAAUG   U AUCAA     C     --     CC    AGAA A               GUU |
Stem-loop sequence | UGCAGAAGUUGUGUAACUCGAGUUUGGGCACUGGUAAUCGAUUACAUACUUUGGUAAUCGAUUACCAGAGAAGAAAACCCUUGAGACAUACCUUUUAACUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006583102.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100807956 (LOC100807956), transcript variant X2, mRNA | uncharacterized LOC100807956(LOC100807956) | coding protein | psRNATarget | |||||||||
XM_003528528.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100807956 (LOC100807956), transcript variant X1, mRNA | uncharacterized LOC100807956(LOC100807956) | coding protein | psRNATarget |