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BaseInfo

ncRNA ID novel_gma_miR5903
Species Glycine max
Class miRNA
Genome position Chr14:31284285-31284362 [+]
Reference genome Glycine_max_v2.0
Source SRR835767
Length 24
Mature sequence(if miRNA) 1 - UUUGGAAUUUGGGUUGAAAAGACG - 24
Stem-loop(if miRNA) --     -    UG        A  CG   A   A    U
  UUUGG AAUU  GGUUGAAA GA  AUU GAC CAAG U
  ||||| ||||  |||||||| ||  ||| ||| |||| U
  AAAUC UUAA  UUAACUUU UU  UAA CUG GUUC G
GU     G    UU        A  AU   -   -    A
Stem-loop sequence UUUGGAAUUUGGGUUGAAAAGACGAUUAGACACAAGUUUGACUUGGUCAAUUAUUAUUUCAAUUUUAAUUGCUAAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003519179.3
ncRNA:24   GCAGAAAAGUUGGGUUUAAGGUUU   1
  =****||||||=|||||||||||*
targets:124   UAGGGUUUCAAUCCAAAUUCCAAU   147

2.5 PREDICTED: Glycine max uncharacterized LOC100780930 (LOC100780930), mRNA uncharacterized LOC100780930(LOC100780930) coding protein psRNATarget