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BaseInfo

ncRNA ID	novel_gma_miR5899
Species	Glycine max
Class	miRNA
Genome position	Chr14:9524128-9524206 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835767
Length	24
Mature sequence(if miRNA)	1 - AAUUUUGUAGGAUUGAGUUAGGCU - 24
Stem-loop(if miRNA)	--A    U       U    --        UAACC     U    AUUU GUAGGAU GAGU  UAGGCUCA     CAUGU A    |||| ||||||| ||||  ||||||||     |||||    UAAA UAUUCUA CUCG  AUCCGAGU     GUACA U UUC    U       -    AU        CUAUA     A
Stem-loop sequence	AAUUUUGUAGGAUUGAGUUAGGCUCAUAACCCAUGUUAUAACAUGAUAUCUGAGCCUAUAGCUCAUCUUAUUAAAUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006591104.2	ncRNA:24   UCGGAUUGAGUUAGGAUGUUUUAA   1   ||=||||||||||||||||||||* targets:3366   AGUCUAACUCAAUCCUACAAAAUC   3389 Target Full Sequence	1.0	PREDICTED: Glycine max TMV resistance protein N-like (LOC100796191), mRNA	TMV resistance protein N-like(LOC100796191)	coding protein	psRNATarget
XM_006590969.2	ncRNA:24   UCGGAUUGAGUUAGGAUGUUUUAA   1   =||=||||||||||||||||||*| targets:2524   GGCUUAACUCAAUCCUACAAAACU   2547 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100797428 (LOC100797428), transcript variant X3, mRNA	uncharacterized LOC100797428(LOC100797428)	coding protein	psRNATarget
XM_006595692.2	ncRNA:24   UCGGAUUGAGUUAGGAUGUUUUAA   1   **|=||||||*||||||||||||* targets:1212   UACUUAACUCCAUCCUACAAAAUA   1235 Target Full Sequence	2.0	PREDICTED: Glycine max AT-hook motif nuclear-localized protein 16-like (LOC100804941), mRNA	AT-hook motif nuclear-localized protein 16-like(LOC100804941)	coding protein	psRNATarget
XM_014775065.1	ncRNA:24   UCGGAUUGAGUUAGGAUGUUUUAA   1   =|==||||||||*||||||||||* targets:1670   GGUUUAACUCAACCCUACAAAAUC   1693 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X4, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget
XM_014775059.1	ncRNA:24   UCGGAUUGAGUUAGGAUGUUUUAA   1   =|==||||||||*||||||||||* targets:1523   GGUUUAACUCAACCCUACAAAAUC   1546 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X1, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget
XM_014775066.1	ncRNA:24   UCGGAUUGAGUUAGGAUGUUUUAA   1   =|==||||||||*||||||||||* targets:1667   GGUUUAACUCAACCCUACAAAAUC   1690 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X5, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget
XM_014775062.1	ncRNA:24   UCGGAUUGAGUUAGGAUGUUUUAA   1   =|==||||||||*||||||||||* targets:1668   GGUUUAACUCAACCCUACAAAAUC   1691 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X3, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget
XM_014775060.1	ncRNA:24   UCGGAUUGAGUUAGGAUGUUUUAA   1   =|==||||||||*||||||||||* targets:1668   GGUUUAACUCAACCCUACAAAAUC   1691 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X2, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget