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BaseInfo

ncRNA ID	novel_gma_miR5892
Species	Glycine max
Class	miRNA
Genome position	Chr1:4782482-4782570 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835767;SRR835768;SRR835770;SRR1451623
Length	21
Mature sequence(if miRNA)	1 - UUGAAGUGUUUUGGGGAACUC - 21
Stem-loop(if miRNA)	--A      U  C       U   ---C    CCUU         U    UUCCCC GA CACUUCA UAG    AACU    AGGUUUCAC A    |||||| || ||||||| |||    ||||    ||||||||| A    AAGGGG UU GUGAAGU AUC    UUGA    UCCGGAGUG C CUC      U  U       U   CUGA    -UAU         A
Stem-loop sequence	AUUCCCCUGACCACUUCAUUAGCAACUCCUUAGGUUUCACUAACAGUGAGGCCUUAUAGUUAGUCCUAUUGAAGUGUUUUGGGGAACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003531315.2	ncRNA:21   CUCAAGGGGUUUUGUGAAGUU   1   ||||||=||*||||||||||| targets:145   GAGUUCUCCCAAACACUUCAA   165 Target Full Sequence	2.5	PREDICTED: Glycine max sulfate transporter 2.1-like (LOC100775538), mRNA	sulfate transporter 2.1-like(LOC100775538)	coding protein	psRNATarget
BT098233.1	ncRNA:21   CUCAAGGGGUUUUGUGAAGUU   1   **|||||=||||||=|||||| targets:192   ACGUUCCUCAAAACGCUUCAA   212 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-23C5 unknown mRNA	NA	coding protein	psRNATarget
XM_014770651.1	ncRNA:21   CUCAAGGGGUUUUGUGAAGUU   1   *|||||=||*||||||||||| targets:215   AAGUUCUCCCAAACACUUCAA   235 Target Full Sequence	2.5	PREDICTED: Glycine max sulfate transporter 2.1-like (LOC100814993), mRNA	sulfate transporter 2.1-like(LOC100814993)	coding protein	psRNATarget
XM_003552772.3	ncRNA:21   CUCAAGGGGUUUUGUGAAGUU   1   *|||||=||*||||||||||| targets:108   AAGUUCUCCCAAACACUUCAA   128 Target Full Sequence	2.5	PREDICTED: Glycine max sulfate transporter 2.1-like (LOC100817831), mRNA	sulfate transporter 2.1-like(LOC100817831)	coding protein	psRNATarget
XM_003538469.3	ncRNA:21   CUCAAGGGGUUUUGUGAAGUU   1   *|||||=||*||||||||||| targets:148   AAGUUCUCCCAAACACUUCAA   168 Target Full Sequence	2.5	PREDICTED: Glycine max sulfate transporter 2.1-like (LOC100781327), mRNA	sulfate transporter 2.1-like(LOC100781327)	coding protein	psRNATarget
XM_014767214.1	ncRNA:21   CUCAAGGGGUUUUGUGAAGUU   1   *|||||*||*||||||||||| targets:515   AAGUUCACCCAAACACUUCAA   535 Target Full Sequence	2.5	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100776591), transcript variant X3, mRNA	low affinity sulfate transporter 3-like(LOC100776591)	coding protein	psRNATarget
XM_006596268.2	ncRNA:21   CUCAAGGGGUUUUGUGAAGUU   1   *|||||*||*||||||||||| targets:516   AAGUUCACCCAAACACUUCAA   536 Target Full Sequence	2.5	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100776591), transcript variant X2, mRNA	low affinity sulfate transporter 3-like(LOC100776591)	coding protein	psRNATarget
XM_006596269.2	ncRNA:21   CUCAAGGGGUUUUGUGAAGUU   1   *|||||*||*||||||||||| targets:519   AAGUUCACCCAAACACUUCAA   539 Target Full Sequence	2.5	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100776591), transcript variant X4, mRNA	low affinity sulfate transporter 3-like(LOC100776591)	coding protein	psRNATarget
XM_003544137.3	ncRNA:21   CUCAAGGGGUUUUGUGAAGUU   1   *|||||*||*||||||||||| targets:507   AAGUUCACCCAAACACUUCAA   527 Target Full Sequence	2.5	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100776591), transcript variant X1, mRNA	low affinity sulfate transporter 3-like(LOC100776591)	coding protein	psRNATarget
XM_006604716.2	ncRNA:21   CUCAAGGGGUUUUGUGAAGUU   1   ||||*=|=||||||||||||| targets:1931   GAGUAUCUCAAAACACUUCAA   1951 Target Full Sequence	3.0	PREDICTED: Glycine max transcription factor PIF3-like (LOC102659557), mRNA	transcription factor PIF3-like(LOC102659557)	coding protein	psRNATarget