ncRNA ID | novel_gma_miR5888 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:25818972-25819101 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835767 |
Length | 22 |
Mature sequence(if miRNA) | 109 - AAAACCGAUGUCGUUAAACACU - 130 |
Stem-loop(if miRNA) |
--           C     A                 UUCAAAU  C         --CA  UUGA   AAAACCGAUGU GUUAA CACUUACAACAUCGGUU       AA CGAUGUUAA    GC    U   ||||||||||| ||||| |||||||||||||||||       || |||||||||    ||   UUUUGGCUACA CAAUU GUGAAUGUUGUAGCCGA       UU GCUACAAUU    CG    U AC           A     C                 UAAAAUU  A         UUAG  UGAU |
Stem-loop sequence | AAAACCGAUGUCGUUAAACACUUACAACAUCGGUUUUCAAAUAACCGAUGUUAACAGCUUGAUUUAGUGCGAUUUUAACAUCGAUUUUAAAAUAGCCGAUGUUGUAAGUGCUUAACAACAUCGGUUUUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006601416.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102666752 (LOC102666752), transcript variant X1, mRNA | uncharacterized LOC102666752(LOC102666752) | coding protein | psRNATarget |