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BaseInfo

ncRNA ID novel_gma_miR5883
Species Glycine max
Class miRNA
Genome position Chr9:5756837-5756899 [+]
Reference genome Glycine_max_v2.0
Source SRR835767;SRR835771
Length 24
Mature sequence(if miRNA) 1 - CGGAGAGAGGCAGAAAAGAAAGGU - 24
Stem-loop(if miRNA) ---CG        C   A   A       AAG
     GAGAGAGG AGA AAG AAGGUUU   G
     |||||||| ||| ||| |||||||   A
     CUUUCUCC UCU UUU UUCUAAA   A
AGGAA        -   C   A       GUG
Stem-loop sequence CGGAGAGAGGCAGAAAAGAAAGGUUUAAGGAAGUGAAAUCUUAUUUCUCUCCUCUUUCAAGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766127.1
ncRNA:24   UGGAAAGAAAAGACGGAGAGAGGC   1
  ||||||||||||||=|||||||||
targets:670   ACCUUUCUUUUCUGUCUCUCUCCG   693

1.5 PREDICTED: Glycine max uncharacterized LOC106795551 (LOC106795551), mRNA uncharacterized LOC106795551(LOC106795551) coding protein psRNATarget