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BaseInfo

ncRNA ID	novel_gma_miR5876
Species	Glycine max
Class	miRNA
Genome position	Chr8:28258068-28258156 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835767
Length	22
Mature sequence(if miRNA)	1 - UUUGAGAAAGUUUAGAUUGAUG - 22
Stem-loop(if miRNA)	--        A  UU       -U   AUAGACUUGUGUGAGGUGA   UUUGAGAA GU  AGAUUGA  GUU                   G   |||||||| ||  |||||||  |||   AAACUUUU CA  UUUAACU  UAC                   A CC        -  -C       CU   UCCAUUUAAACCUCGUUUG
Stem-loop sequence	UUUGAGAAAGUUUAGAUUGAUGUUAUAGACUUGUGUGAGGUGAGAGUUUGCUCCAAAUUUACCUCAUUCUCAAUUUCACUUUUCAAACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006601291.2	ncRNA:22   GUAGUUAGAUUUGAAAGAGUUU   1   =***=||||||||||||||||= targets:1667   UUGGGAUCUAAACUUUCUCAAG   1688 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100785193 (LOC100785193), transcript variant X2, mRNA	uncharacterized LOC100785193(LOC100785193)	coding protein	psRNATarget
XM_006601290.2	ncRNA:22   GUAGUUAGAUUUGAAAGAGUUU   1   =***=||||||||||||||||= targets:1807   UUGGGAUCUAAACUUUCUCAAG   1828 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100785193 (LOC100785193), transcript variant X1, mRNA	uncharacterized LOC100785193(LOC100785193)	coding protein	psRNATarget
XM_014766537.1	ncRNA:22   GUAGUUAGAUUUGAAAGAGUUU   1   =***=||||||||||||||||= targets:1897   UUGGGAUCUAAACUUUCUCAAG   1918 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100788162 (LOC100788162), transcript variant X4, mRNA	uncharacterized LOC100788162(LOC100788162)	coding protein	psRNATarget
XM_006596484.2	ncRNA:22   GUAGUUAGAUUUGAAAGAGUUU   1   =***=||||||||||||||||= targets:1925   UUGGGAUCUAAACUUUCUCAAG   1946 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100788162 (LOC100788162), transcript variant X3, mRNA	uncharacterized LOC100788162(LOC100788162)	coding protein	psRNATarget
XM_006596482.2	ncRNA:22   GUAGUUAGAUUUGAAAGAGUUU   1   =***=||||||||||||||||= targets:1965   UUGGGAUCUAAACUUUCUCAAG   1986 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100788162 (LOC100788162), transcript variant X1, mRNA	uncharacterized LOC100788162(LOC100788162)	coding protein	psRNATarget
XM_014766536.1	ncRNA:22   GUAGUUAGAUUUGAAAGAGUUU   1   =***=||||||||||||||||= targets:2048   UUGGGAUCUAAACUUUCUCAAG   2069 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100788162 (LOC100788162), transcript variant X2, mRNA	uncharacterized LOC100788162(LOC100788162)	coding protein	psRNATarget