Search result

BaseInfo

ncRNA ID	novel_gma_miR5866
Species	Glycine max
Class	miRNA
Genome position	Chr6:19635500-19635598 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835767
Length	24
Mature sequence(if miRNA)	76 - AAAGAAUGAAUGCGUGAAUCGGUU - 99
Stem-loop(if miRNA)	--  U    -     C   GA         CU     U    AG   A   G   CU AUUC UGCAU UCG  CUUUGUUUU  GUUAG CUUU  GCC CUC G   || |||| ||||| |||  |||||||||  ||||| ||||  ||| |||   GG UAAG GCGUA AGU  GAAAUAGGG  UAAUC GAAA  UGG GAG G UU  C    U     -   AA         AU     C    --   -   A
Stem-loop sequence	CUUAUUCUGCAUCUCGGACUUUGUUUUCUGUUAGUCUUUAGGCCACUCGGGAGAGGGUAAAGCCUAAUUAGGGAUAAAGAAUGAAUGCGUGAAUCGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014765186.1	ncRNA:24   UUGGCUAAGUGCGUAAGUAAGAAA   1   **|||*|||||||||||||||*|| targets:112   CUCCGCUUCACGCAUUCAUUCCUU   135 Target Full Sequence	2.5	PREDICTED: Glycine max mitochondrial outer membrane protein porin of 36 kDa-like (LOC100790270), transcript variant X2, mRNA	mitochondrial outer membrane protein porin of 36 kDa-like(LOC100790270)	coding protein	psRNATarget
NM_001255962.2	ncRNA:24   UUGGCUAAGUGCGUAAGUAAGAAA   1   **||**|||||||||||||||*|| targets:62   CUCCACUUCACGCAUUCAUUCCUU   85 Target Full Sequence	2.5	Glycine max mitochondrial outer membrane protein porin of 36 kDa-like (LOC100790270), mRNA	mitochondrial outer membrane protein porin of 36 kDa-like(LOC100790270)	coding protein	psRNATarget
BT093533.1	ncRNA:24   UUGGCUAAGUGCGUAAGUAAGAAA   1   **||**|||||||||||||||*|| targets:66   CUCCACUUCACGCAUUCAUUCCUU   89 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-17M16 unknown mRNA	NA	coding protein	psRNATarget