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BaseInfo

ncRNA ID	novel_gma_miR5857
Species	Glycine max
Class	miRNA
Genome position	Chr4:52130928-52130984 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835767
Length	21
Mature sequence(if miRNA)	1 - AAGUGCAUAAGUUGGUUUUAG - 21
Stem-loop(if miRNA)	--                 CUC      U   AAAAUCAACUUAUGCAC   AGCUUU G   |||||||||||||||||   ||||||   UUUUGGUUGAAUACGUG   UUGAAG G GA                 -AA      A
Stem-loop sequence	AAAAUCAACUUAUGCACCUCAGCUUUUGGAGAAGUUAAGUGCAUAAGUUGGUUUUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI410449.1	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   =|||||=|||||||||||||| targets:10   UUAAAAUCAACUUAUGCACUU   30 Target Full Sequence	1.0	Sequence 8574 from Patent EP2074227	NA	coding protein	psRNATarget
JB170910.1	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   =|||||=|||||||||||||| targets:10   UUAAAAUCAACUUAUGCACUU   30 Target Full Sequence	1.0	Sequence 8574 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242579.1	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   =|||||=|||||||||||||| targets:10   UUAAAAUCAACUUAUGCACUU   30 Target Full Sequence	1.0	Sequence 8574 from Patent EP2985353	NA	coding protein	psRNATarget
BT094855.1	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   =|||||=|||||||||||||| targets:20   UUAAAAUCAACUUAUGCACUU   40 Target Full Sequence	1.0	Soybean clone JCVI-FLGm-6E24 unknown mRNA	NA	coding protein	psRNATarget
BT095764.1	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   =|||||=|||||||||||||| targets:999   UUAAAAUCAACUUAUGCACUU   1019 Target Full Sequence	1.0	Soybean clone JCVI-FLGm-15K19 unknown mRNA	NA	coding protein	psRNATarget
XM_003518975.3	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   =|||||=|||||||||||||| targets:1049   UUAAAAUCAACUUAUGCACUU   1069 Target Full Sequence	1.0	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X3, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
XM_006574485.2	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   =|||||=|||||||||||||| targets:1070   UUAAAAUCAACUUAUGCACUU   1090 Target Full Sequence	1.0	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X2, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
XM_006574484.2	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   =|||||=|||||||||||||| targets:1082   UUAAAAUCAACUUAUGCACUU   1102 Target Full Sequence	1.0	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X1, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
XM_006593880.2	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   =|||||=|||||||||||||| targets:2976   UUAAAAUCAACUUAUGCACUU   2996 Target Full Sequence	1.0	PREDICTED: Glycine max phospholipid:diacylglycerol acyltransferase 1-like (LOC100779225), transcript variant X3, mRNA	phospholipid:diacylglycerol acyltransferase 1-like(LOC100779225)	coding protein	psRNATarget
XM_003541248.3	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   =|||||=|||||||||||||| targets:3130   UUAAAAUCAACUUAUGCACUU   3150 Target Full Sequence	1.0	PREDICTED: Glycine max phospholipid:diacylglycerol acyltransferase 1-like (LOC100779225), transcript variant X1, mRNA	phospholipid:diacylglycerol acyltransferase 1-like(LOC100779225)	coding protein	psRNATarget
XM_006582823.2	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   =|||||==||||||||||||| targets:947   UUAAAAUUAACUUAUGCACUU   967 Target Full Sequence	2.0	PREDICTED: Glycine max phosphopantothenoylcysteine decarboxylase-like (LOC100778368), transcript variant X2, mRNA	phosphopantothenoylcysteine decarboxylase-like(LOC100778368)	coding protein	psRNATarget
XM_006574366.2	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   ||||||=||=||||||||||| targets:1333   CUAAAAUCAGCUUAUGCACUU   1353 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100798622 (LOC100798622), transcript variant X1, mRNA	uncharacterized LOC100798622(LOC100798622)	coding protein	psRNATarget
XM_003547685.3	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   *|||||=|||=|||||||||| targets:2794   AUAAAAUCAAUUUAUGCACUU   2814 Target Full Sequence	2.5	PREDICTED: Glycine max long-chain-alcohol oxidase FAO4A-like (LOC100778208), mRNA	long-chain-alcohol oxidase FAO4A-like(LOC100778208)	coding protein	psRNATarget
XM_014764118.1	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   =|||||=|||||*|||||||| targets:969   UUAAAAUCAACUCAUGCACUU   989 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100779185 (LOC100779185), transcript variant X3, mRNA	uncharacterized LOC100779185(LOC100779185)	coding protein	psRNATarget
NM_001252958.2	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   |*|=||*|||||||||||||* targets:760   CCAGAAGCAACUUAUGCACUA   780 Target Full Sequence	3.0	Glycine max uncharacterized LOC100775728 (LOC100775728), mRNA	uncharacterized LOC100775728(LOC100775728)	coding protein	psRNATarget
BT093363.1	ncRNA:21   GAUUUUGGUUGAAUACGUGAA   1   |*|=||*|||||||||||||* targets:762   CCAGAAGCAACUUAUGCACUA   782 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-17O3 unknown mRNA	NA	coding protein	psRNATarget