Search result

BaseInfo

ncRNA ID novel_gma_miR5853
Species Glycine max
Class miRNA
Genome position Chr7:12106216-12106266 [-]
Reference genome Glycine_max_v2.0
Source SRR835766
Length 24
Mature sequence(if miRNA) 1 - UAACUGUCUUAGAAUGUACGUCGU - 24
Stem-loop(if miRNA) --   AUA                UC
  GAU   ACAUUCUAAGGCGGUU  C
  |||   ||||||||||||||||
  CUG   UGUAAGAUUCUGUCAA  A
UG   -CA                UA
Stem-loop sequence GAUAUAACAUUCUAAGGCGGUUUCCAAUAACUGUCUUAGAAUGUACGUCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773514.1
ncRNA:24   UGCUGCAUGUAAGAUUCUGUCAAU   1
  ||*||||*=||||||||||||||=
targets:352   ACAACGUUUAUUCUAAGACAGUUG   375

3.0 PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA uncharacterized LOC106798042(LOC106798042) coding protein psRNATarget