ncRNA ID | novel_gma_miR5852 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:1416033-1416107 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835766 |
Length | 24 |
Mature sequence(if miRNA) | 52 - UUUUAUUGGGAAAGAAAGUAUUUA - 75 |
Stem-loop(if miRNA) |
--U             A              CUUUUG    UUUAUUGGGAAAG AAGUAUUUAUUGCA      C    ||||||||||||| ||||||||||||||      A    AAAUAACUCUUUU UUCAUAAAUAAUGU      U CAU             G              AUUUUU |
Stem-loop sequence | UUUUAUUGGGAAAGAAAGUAUUUAUUGCACUUUUGCAUUUUUUAUGUAAUAAAUACUUGUUUUCUCAAUAAAUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006578392.2 |
|
2.5 | PREDICTED: Glycine max protein DENND6A-like (LOC100782429), transcript variant X3, mRNA | protein DENND6A-like(LOC100782429) | coding protein | psRNATarget | |||||||||
XM_003523969.3 |
|
2.5 | PREDICTED: Glycine max protein DENND6A-like (LOC100782429), transcript variant X1, mRNA | protein DENND6A-like(LOC100782429) | coding protein | psRNATarget |