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BaseInfo

ncRNA ID novel_gma_miR5851
Species Glycine max
Class miRNA
Genome position Chr5:14895837-14895921 [+]
Reference genome Glycine_max_v2.0
Source SRR835766;SRR835767;SRR835770;SRR835772;SRR1451607
Length 22
Mature sequence(if miRNA) 1 - UCUUUGCUGCCUCAGACGUCAU - 22
Stem-loop(if miRNA) --   UUG  G  --       U   U   CCAAAUUUCUU    C   C
  UCU   CU CC  UCAGACG CAU UGA           GGUG AGG C
  |||   || ||  ||||||| ||| |||           |||| |||
  AGG   GA GG  AGUCUGC GUG ACU           UCAC UUC U
GA   -UA  -  AU       U   C   -----------    C   U
Stem-loop sequence UCUUUGCUGCCUCAGACGUCAUUUGACCAAAUUUCUUGGUGCAGGCCUUCUUCCACUUCACGUGUCGUCUGAUAGGAGAUGGAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014770986.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  ||||||||||||||||||||||
targets:991   AUGACGUCUGAGGCAGCAAAGA   1012

0.0 PREDICTED: Glycine max uncharacterized LOC106797154 (LOC106797154), transcript variant X2, mRNA uncharacterized LOC106797154(LOC106797154) coding protein psRNATarget
XM_014770985.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  ||||||||||||||||||||||
targets:1086   AUGACGUCUGAGGCAGCAAAGA   1107

0.0 PREDICTED: Glycine max uncharacterized LOC106797154 (LOC106797154), transcript variant X1, mRNA uncharacterized LOC106797154(LOC106797154) coding protein psRNATarget
XM_014776018.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||||||||||||||||||=
targets:343   AUGACGUCUGAGGCAGCAAAGG   364

1.0 PREDICTED: Glycine max uncharacterized LOC106798841 (LOC106798841), mRNA uncharacterized LOC106798841(LOC106798841) coding protein psRNATarget
XM_014777033.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||||||||||||||||||=
targets:457   AUGACGUCUGAGGCAGCAAAGG   478

1.0 PREDICTED: Glycine max uncharacterized LOC106799075 (LOC106799075), mRNA uncharacterized LOC106799075(LOC106799075) coding protein psRNATarget
XM_014770450.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||||||||||||||||||=
targets:1   AUGACGUCUGAGGCAGCAAAGG   22

1.0 PREDICTED: Glycine max uncharacterized LOC106796841 (LOC106796841), mRNA uncharacterized LOC106796841(LOC106796841) coding protein psRNATarget
XM_014770488.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||||||||||||||||||=
targets:1276   AUGACGUCUGAGGCAGCAAAGG   1297

1.0 PREDICTED: Glycine max uncharacterized LOC106796856 (LOC106796856), mRNA uncharacterized LOC106796856(LOC106796856) coding protein psRNATarget
XM_014773484.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||||||||||||||||||=
targets:1324   AUGACGUCUGAGGCAGCAAAGG   1345

1.0 PREDICTED: Glycine max uncharacterized LOC102662694 (LOC102662694), transcript variant X2, mRNA uncharacterized LOC102662694(LOC102662694) coding protein psRNATarget
XM_014773485.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||||||||||||||||||=
targets:1413   AUGACGUCUGAGGCAGCAAAGG   1434

1.0 PREDICTED: Glycine max uncharacterized LOC102662694 (LOC102662694), transcript variant X3, mRNA uncharacterized LOC102662694(LOC102662694) coding protein psRNATarget
XM_014773483.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||||||||||||||||||=
targets:1820   AUGACGUCUGAGGCAGCAAAGG   1841

1.0 PREDICTED: Glycine max uncharacterized LOC102662694 (LOC102662694), transcript variant X1, mRNA uncharacterized LOC102662694(LOC102662694) coding protein psRNATarget
XM_003547409.3
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  ||||=||||||||||||||||=
targets:522   AUGAUGUCUGAGGCAGCAAAGG   543

2.0 PREDICTED: Glycine max uncharacterized LOC100789246 (LOC100789246), transcript variant X1, mRNA uncharacterized LOC100789246(LOC100789246) coding protein psRNATarget
XM_014762422.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  ||||||*||||||||||||||=
targets:755   AUGACGCCUGAGGCAGCAAAGG   776

2.0 PREDICTED: Glycine max uncharacterized LOC106794681 (LOC106794681), mRNA uncharacterized LOC106794681(LOC106794681) coding protein psRNATarget
XM_014761988.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||*|||||||||||||||=
targets:211   AUGACAUCUGAGGCAGCAAAGG   232

2.0 PREDICTED: Glycine max uncharacterized LOC106794548 (LOC106794548), transcript variant X1, mRNA uncharacterized LOC106794548(LOC106794548) coding protein psRNATarget
XM_014761990.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||*|||||||||||||||=
targets:211   AUGACAUCUGAGGCAGCAAAGG   232

2.0 PREDICTED: Glycine max uncharacterized LOC106794548 (LOC106794548), transcript variant X2, mRNA uncharacterized LOC106794548(LOC106794548) coding protein psRNATarget
XM_014771500.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||*|||||||||||||||=
targets:899   AUGACAUCUGAGGCAGCAAAGG   920

2.0 PREDICTED: Glycine max uncharacterized LOC102662230 (LOC102662230), transcript variant X2, mRNA uncharacterized LOC102662230(LOC102662230) coding protein psRNATarget
XM_014771499.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||*|||||||||||||||=
targets:899   AUGACAUCUGAGGCAGCAAAGG   920

2.0 PREDICTED: Glycine max uncharacterized LOC102662230 (LOC102662230), transcript variant X1, mRNA uncharacterized LOC102662230(LOC102662230) coding protein psRNATarget
XM_014770086.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||*|||||||||||||||=
targets:2229   AUGACAUCUGAGGCAGCAAAGG   2250

2.0 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X2, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014770087.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||*|||||||||||||||=
targets:2229   AUGACAUCUGAGGCAGCAAAGG   2250

2.0 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X3, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014770089.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||*|||||||||||||||=
targets:2142   AUGACAUCUGAGGCAGCAAAGG   2163

2.0 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X5, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014770088.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||*|||||||||||||||=
targets:2149   AUGACAUCUGAGGCAGCAAAGG   2170

2.0 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X4, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014770085.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||*|||||||||||||||=
targets:2229   AUGACAUCUGAGGCAGCAAAGG   2250

2.0 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X1, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014761634.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||||||||||||*|||||=
targets:133   AUGACGUCUGAGGCAACAAAGG   154

2.5 PREDICTED: Glycine max serine/threonine-protein kinase Aurora-3-like (LOC106794372), mRNA serine/threonine-protein kinase Aurora-3-like(LOC106794372) coding protein psRNATarget
XM_006593125.2
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  |||||||||||||||*|||||=
targets:986   AUGACGUCUGAGGCAACAAAGG   1007

2.5 PREDICTED: Glycine max uncharacterized LOC102661906 (LOC102661906), mRNA uncharacterized LOC102661906(LOC102661906) coding protein psRNATarget
XM_014776335.1
ncRNA:22   UACUGCAGACUCCGUCGUUUCU   1
  *|||*||||*||||||||||||
targets:2107   UUGAAGUCUAAGGCAGCAAAGA   2128

2.5 PREDICTED: Glycine max uncharacterized LOC106798924 (LOC106798924), mRNA uncharacterized LOC106798924(LOC106798924) coding protein psRNATarget
XM_014770569.1
ncRNA:22   UACUGCAGACUCCGUCGUUU-CU   1
  ||||||||||||||||||||-||
targets:665   AUGACGUCUGAGGCAGCAAAAGA   687

3.0 PREDICTED: Glycine max uncharacterized LOC102664574 (LOC102664574), mRNA uncharacterized LOC102664574(LOC102664574) coding protein psRNATarget
XM_014774672.1
ncRNA:22   UACUGCAGACUCCGUCGUUU-CU   1
  ||||||||||||||||||||-||
targets:956   AUGACGUCUGAGGCAGCAAAUGA   978

3.0 PREDICTED: Glycine max uncharacterized LOC102661438 (LOC102661438), mRNA uncharacterized LOC102661438(LOC102661438) coding protein psRNATarget
XM_014770570.1
ncRNA:22   UACUGCAGACUCCGUCGUUU-CU   1
  ||||||||||||||||||||-||
targets:289   AUGACGUCUGAGGCAGCAAAAGA   311

3.0 PREDICTED: Glycine max uncharacterized LOC106796922 (LOC106796922), mRNA uncharacterized LOC106796922(LOC106796922) coding protein psRNATarget
XM_014763110.1
ncRNA:22   UACUGCAGACUCCGUCGUUU-CU   1
  ||||||||||||||||||||-||
targets:812   AUGACGUCUGAGGCAGCAAAAGA   834

3.0 PREDICTED: Glycine max uncharacterized LOC106794980 (LOC106794980), mRNA uncharacterized LOC106794980(LOC106794980) coding protein psRNATarget
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