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BaseInfo

ncRNA ID novel_gma_miR5846
Species Glycine max
Class miRNA
Genome position Chr4:12205643-12205699 [-]
Reference genome Glycine_max_v2.0
Source SRR835766
Length 24
Mature sequence(if miRNA) 34 - ACAAUAGAACUAUGAUUUCGGUGU - 57
Stem-loop(if miRNA) --         C A        G    C
  ACAAUAGAA U UGAUUUCG UGUA A
  ||||||||| | |||||||| |||| C
  UGUUAUUUU A AUUAAAGU ACGU U
CA         C A        A    A
Stem-loop sequence ACAAUAGAACUAUGAUUUCGGUGUACACUAUGCAAUGAAAUUAAACUUUUAUUGUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003556192.3
ncRNA:24   UGUGGCUUUAGUAUCAAGAUAACA   1
  |||**|=|||||||*|||||||||
targets:350   ACAAAGGAAUCAUACUUCUAUUGU   373

2.5 PREDICTED: Glycine max DNL-type zinc finger protein-like (LOC100819850), mRNA DNL-type zinc finger protein-like(LOC100819850) coding protein psRNATarget
BT092211.1
ncRNA:24   UGUGGCUU-UAGUAUCAAGAUAACA   1
  **|=*|||-||=|||||||||||||
targets:722   UAAUGGAAGAUUAUAGUUCUAUUGU   746

3.0 Soybean clone JCVI-FLGm-10I14 unknown mRNA NA coding protein psRNATarget
NM_001248215.1
ncRNA:24   UGUGGCUU-UAGUAUCAAGAUAACA   1
  **|=*|||-||=|||||||||||||
targets:722   UAAUGGAAGAUUAUAGUUCUAUUGU   746

3.0 Glycine max armadillo/beta-catenin-like repeat protein (LOC100527372), mRNA armadillo/beta-catenin-like repeat protein(LOC100527372) coding protein psRNATarget