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BaseInfo

ncRNA ID novel_gma_miR5844
Species Glycine max
Class miRNA
Genome position Chr3:44895298-44895374 [-]
Reference genome Glycine_max_v2.0
Source SRR835766;SRR835767;SRR835768;SRR835770;SRR835771;SRR835772
Length 21
Mature sequence(if miRNA) 57 - UGGAGAAGGGGAGCACGUGCA - 77
Stem-loop(if miRNA) --        G  A         AAG    CAG    AUU
  UGGAGAAG GG GCACGUGCA   GGUU   UGGC   U
  |||||||| || |||||||||   ||||   ||||
  ACCUCUUC UC CGUGCACGU   UCAG   ACCG   G
CA        G  C         ---    AGA    AGA
Stem-loop sequence UGGAGAAGGGGAGCACGUGCAAAGGGUUCAGUGGCAUUUGAGAGCCAAGAGACUUGCACGUGCCCUGCUUCUCCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535646.3
ncRNA:21   ACGUGCACGAGGGGAAGAGGU   1
  |*|||||*|||*|||||||||
targets:685   UCCACGUUCUCACCUUCUCCA   705

2.5 PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g08820 (LOC100807506), mRNA putative pentatricopeptide repeat-containing protein At3g08820(LOC100807506) coding protein psRNATarget