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BaseInfo

ncRNA ID novel_gma_miR5834
Species Glycine max
Class miRNA
Genome position Chr2:1535431-1535510 [-]
Reference genome Glycine_max_v2.0
Source SRR835766;SRR835767;SRR835768;SRR835771;SRR835772
Length 21
Mature sequence(if miRNA) 60 - UGGAGAAGGGGAGCACGUGCA - 80
Stem-loop(if miRNA) --        G  A          AGGG   AA    G   
  UGGAGAAG GG GCACGUGCAA    UUC  UGGC CUUA
  |||||||| || ||||||||||    |||  |||| |||A
  ACCUCUUC UC CGUGCACGUU    GAG  GCCG GAGA
CA        G  C          --GA   -A    A   
Stem-loop sequence UGGAGAAGGGGAGCACGUGCAAAGGGUUCAAUGGCGCUUAAAGAGAGCCGAGAGAGUUGCACGUGCCCUGCUUCUCCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535646.3
ncRNA:21   ACGUGCACGAGGGGAAGAGGU   1
  |*|||||*|||*|||||||||
targets:685   UCCACGUUCUCACCUUCUCCA   705

2.5 PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g08820 (LOC100807506), mRNA putative pentatricopeptide repeat-containing protein At3g08820(LOC100807506) coding protein psRNATarget