ncRNA ID | novel_gma_miR5834 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:1535431-1535510 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835766;SRR835767;SRR835768;SRR835771;SRR835772 |
Length | 21 |
Mature sequence(if miRNA) | 60 - UGGAGAAGGGGAGCACGUGCA - 80 |
Stem-loop(if miRNA) |
--        G  A          AGGG   AA    G      UGGAGAAG GG GCACGUGCAA    UUC  UGGC CUUA   |||||||| || ||||||||||    |||  |||| |||A   ACCUCUUC UC CGUGCACGUU    GAG  GCCG GAGA CA        G  C          --GA   -A    A    |
Stem-loop sequence | UGGAGAAGGGGAGCACGUGCAAAGGGUUCAAUGGCGCUUAAAGAGAGCCGAGAGAGUUGCACGUGCCCUGCUUCUCCAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003535646.3 |
|
2.5 | PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g08820 (LOC100807506), mRNA | putative pentatricopeptide repeat-containing protein At3g08820(LOC100807506) | coding protein | psRNATarget |