ncRNA ID | novel_gma_miR5832 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:46912459-46912552 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835766;SRR835770 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGGAGAAGGGGAGCACGUGCA - 21 |
Stem-loop(if miRNA) |
--        G  A          AA    AUAAA    AG -    AU   UGGAGAAG GG GCACGUGCAA  UCAG     CUAG  C AGCU  A   |||||||| || ||||||||||  ||||     ||||  | ||||  A   ACCUCUUC UC CGUGCACGUU  AGUC     GAUC  G UCGA  U CA        G  C          -G    ---AA    AA A    GA |
Stem-loop sequence | UGGAGAAGGGGAGCACGUGCAAAAUCAGAUAAACUAGAGCAGCUAUAAUAGAGCUAGAACUAGAACUGAGUUGCACGUGCCCUGCUUCUCCAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003535646.3 |
|
2.5 | PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g08820 (LOC100807506), mRNA | putative pentatricopeptide repeat-containing protein At3g08820(LOC100807506) | coding protein | psRNATarget |