Search result

BaseInfo

ncRNA ID novel_gma_miR5830
Species Glycine max
Class miRNA
Genome position Chr19:49681256-49681332 [-]
Reference genome Glycine_max_v2.0
Source SRR835766;SRR835767;SRR835768;SRR835770;SRR835771;SRR835772
Length 21
Mature sequence(if miRNA) 57 - UGGAGAAGGGGAGCACGUGCA - 77
Stem-loop(if miRNA) --        G  A         AAG    CAG   C   
  UGGAGAAG GG GCACGUGCA   GGUU   UGG AUUU
  |||||||| || |||||||||   ||||   ||| |||G
  ACCUCUUC UC CGUGCACGU   UCAG   ACC UAGA
CA        G  C         ---    AGA   -   
Stem-loop sequence UGGAGAAGGGGAGCACGUGCAAAGGGUUCAGUGGCAUUUGAGAUCCAAGAGACUUGCACGUGCCCUGCUUCUCCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535646.3
ncRNA:21   ACGUGCACGAGGGGAAGAGGU   1
  |*|||||*|||*|||||||||
targets:685   UCCACGUUCUCACCUUCUCCA   705

2.5 PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g08820 (LOC100807506), mRNA putative pentatricopeptide repeat-containing protein At3g08820(LOC100807506) coding protein psRNATarget