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BaseInfo

ncRNA ID novel_gma_miR5822
Species Glycine max
Class miRNA
Genome position Chr14:34678009-34678222 [+]
Reference genome Glycine_max_v2.0
Source SRR1295518
Length 24
Mature sequence(if miRNA) 191 - AAGAAUCAUGAAACUAUAGGGACC - 214
Stem-loop(if miRNA) --               A               A          - UU AAAUUACAGGGACUGAAAGAGAAUUAAAAUGUAAACUAUAGGGACUAAAAAAAAUACUU
  UCCCUAUAGUUUCAU AUUCUUACUUUUUUA UCCCUAUAAU U  C                                                           U
  ||||||||||||||| ||||||||||||||| |||||||||| |  |                                                           U
  AGGGAUAUCAAAGUA UAAGAAUGGAAAAAU AGGGAUAUUA A  C                                                           A
CC               C               C          A -- UUUCACCAGAAAAAUCAGGGAUAUCAAAUGUAAAAUUAAAAGAAAAUCAGGGACAUCAA
Stem-loop sequence UCCCUAUAGUUUCAUAAUUCUUACUUUUUUAAUCCCUAUAAUUUUCAAAUUACAGGGACUGAAAGAGAAUUAAAAUGUAAACUAUAGGGACUAAAAAAAAUACUUUUAAACUACAGGGACUAAAAGAAAAUUAAAAUGUAAACUAUAGGGACUAAAAAGACCACUUUCAAAUUAUAGGGACUAAAAAGGUAAGAAUCAUGAAACUAUAGGGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006579499.2
ncRNA:24   CCAGGGAUAUCAAAGUACUAAGAA   1
  **||==||||*|||||||||||||
targets:831   UUUCUUUAUAUUUUCAUGAUUCUU   854

2.0 PREDICTED: Glycine max uncharacterized LOC102661934 (LOC102661934), mRNA uncharacterized LOC102661934(LOC102661934) coding protein psRNATarget