ncRNA ID | novel_gma_miR5822 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:34678009-34678222 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295518 |
Length | 24 |
Mature sequence(if miRNA) | 191 - AAGAAUCAUGAAACUAUAGGGACC - 214 |
Stem-loop(if miRNA) |
--               A               A          - UU AAAUUACAGGGACUGAAAGAGAAUUAAAAUGUAAACUAUAGGGACUAAAAAAAAUACUU   UCCCUAUAGUUUCAU AUUCUUACUUUUUUA UCCCUAUAAU U  C                                                           U   ||||||||||||||| ||||||||||||||| |||||||||| |  |                                                           U   AGGGAUAUCAAAGUA UAAGAAUGGAAAAAU AGGGAUAUUA A  C                                                           A CC               C               C          A -- UUUCACCAGAAAAAUCAGGGAUAUCAAAUGUAAAAUUAAAAGAAAAUCAGGGACAUCAA |
Stem-loop sequence | UCCCUAUAGUUUCAUAAUUCUUACUUUUUUAAUCCCUAUAAUUUUCAAAUUACAGGGACUGAAAGAGAAUUAAAAUGUAAACUAUAGGGACUAAAAAAAAUACUUUUAAACUACAGGGACUAAAAGAAAAUUAAAAUGUAAACUAUAGGGACUAAAAAGACCACUUUCAAAUUAUAGGGACUAAAAAGGUAAGAAUCAUGAAACUAUAGGGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006579499.2 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC102661934 (LOC102661934), mRNA | uncharacterized LOC102661934(LOC102661934) | coding protein | psRNATarget |