Search result

BaseInfo

ncRNA ID novel_gma_miR5820
Species Glycine max
Class miRNA
Genome position Chr18:12379913-12380002 [-]
Reference genome Glycine_max_v2.0
Source SRR835766
Length 21
Mature sequence(if miRNA) 70 - UCUAAGACGGUUAUUACAUCA - 90
Stem-loop(if miRNA) --                         UA  C       CAG GU
  UCUAAGACGGUUAUUACAUCAGAAU  UC UAGAAAG   G  C
  |||||||||||||||||||||||||  || |||||||   |
  AGAUUCUGCUAAUAAUGUAGUUUUG  AG AUUUUUC   C  U
UA                         GC  A       AAA AA
Stem-loop sequence UCUAAGACGGUUAUUACAUCAGAAUUAUCCUAGAAAGCAGGGUCUAACAAACUUUUUAAGACGGUUUUGAUGUAAUAAUCGUCUUAGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014769760.1
ncRNA:21   ACUACAUUAUUGGCAGAAUCU   1
  *|*|*||||||||||||||||
targets:1860   GGUUUUAAUAACCGUCUUAGA   1880

2.0 PREDICTED: Glycine max cucumisin-like (LOC100816048), mRNA cucumisin-like(LOC100816048) coding protein psRNATarget