ncRNA ID | novel_gma_miR5815 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:36361104-36361204 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835766;SRR835770 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGAAUGGUGAGGAUGAAGAGU - 21 |
Stem-loop(if miRNA) |
--   C               U   C           ----C   -    AUU   UCU CAUCCUUACCAUUCA UUU UUGAAAUCUAA     GUA UAAG   A   ||| ||||||||||||||| ||| |||||||||||     ||| ||||   AGA GUAGGAGUGGUAAGU AAA AAUUUUAGAUU     CAU AUUC   G UG   A               U   A           ACCAA   U    AGU |
Stem-loop sequence | UCUCCAUCCUUACCAUUCAUUUUCUUGAAAUCUAACGUAUAAGAUUAGUGACUUAUUACAACCAUUAGAUUUUAAAAAAUUGAAUGGUGAGGAUGAAGAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006575371.2 |
|
1.5 | PREDICTED: Glycine max protein LURP-one-related 7-like (LOC100806967), mRNA | protein LURP-one-related 7-like(LOC100806967) | coding protein | psRNATarget | |||||||||
XM_006595767.2 |
|
2.0 | PREDICTED: Glycine max glucan endo-1,3-beta-glucosidase 12-like (LOC100797861), mRNA | glucan endo-1,3-beta-glucosidase 12-like(LOC100797861) | coding protein | psRNATarget | |||||||||
XM_003540279.3 |
|
2.5 | PREDICTED: Glycine max xyloglucan endotransglucosylase/hydrolase protein 9 (LOC100527891), mRNA | xyloglucan endotransglucosylase/hydrolase protein 9(LOC100527891) | coding protein | psRNATarget |