Search result

BaseInfo

ncRNA ID novel_gma_miR5814
Species Glycine max
Class miRNA
Genome position Chr1:49068993-49069102 [+]
Reference genome Glycine_max_v2.0
Source SRR835766
Length 21
Mature sequence(if miRNA) 90 - AAGGGAUAGCAGAGAAGUCAA - 110
Stem-loop(if miRNA) --                         CUU                        A
  GGCUUCUCUGCUGUCCCUUUUCAAG   UCCCUGUGCUUUCCCUUCAAAACG U
  |||||||||||||||||||||||||   ||||||||||||||||||||||||
  CUGAAGAGACGAUAGGGAAAAGUUC   AGGGGUACGAAAGGGAAGUUUUGC G
AA                         AAC                        U
Stem-loop sequence GGCUUCUCUGCUGUCCCUUUUCAAGCUUUCCCUGUGCUUUCCCUUCAAAACGAUGUCGUUUUGAAGGGAAAGCAUGGGGACAACUUGAAAAGGGAUAGCAGAGAAGUCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763703.1
ncRNA:21   AACUGAAGAGACGAUAGGGAA   1
  **|||*|||||||||||=|||
targets:612   ACGACAUCUCUGCUAUCUCUU   632

2.5 PREDICTED: Glycine max lysine histidine transporter 2-like (LOC100807881), mRNA lysine histidine transporter 2-like(LOC100807881) coding protein psRNATarget