ncRNA ID | novel_gma_miR5812 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:31942396-31942498 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295518 |
Length | 24 |
Mature sequence(if miRNA) | 80 - UAGAAACGGAUGGAAGAGAAGGGA - 103 |
Stem-loop(if miRNA) |
UUUUA       AG      ---C       ---A    UUUAAUCUCUCAUAG      UCUUUUU  GUCUGU    AAACCCU    AGGG               U      |||||||  ||||||    |||||||    ||||      AGAGAAG  UAGGCA    UUUGGGG    GUUC               C AGGGA       -G      AAGA       AAAA    ACAUUUUAGAACAUA |
Stem-loop sequence | UUUUAUCUUUUUAGGUCUGUCAAACCCUAAGGGUUUAAUCUCUCAUAGUCAUACAAGAUUUUACACUUGAAAAGGGGUUUAGAAACGGAUGGAAGAGAAGGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003535554.3 |
|
2.5 | PREDICTED: Glycine max scarecrow-like protein 8 (LOC100797571), mRNA | scarecrow-like protein 8(LOC100797571) | coding protein | psRNATarget |