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BaseInfo

ncRNA ID novel_gma_miR5812
Species Glycine max
Class miRNA
Genome position Chr13:31942396-31942498 [+]
Reference genome Glycine_max_v2.0
Source SRR1295518
Length 24
Mature sequence(if miRNA) 80 - UAGAAACGGAUGGAAGAGAAGGGA - 103
Stem-loop(if miRNA) UUUUA       AG      ---C       ---A    UUUAAUCUCUCAUAG
     UCUUUUU  GUCUGU    AAACCCU    AGGG               U
     |||||||  ||||||    |||||||    ||||
     AGAGAAG  UAGGCA    UUUGGGG    GUUC               C
AGGGA       -G      AAGA       AAAA    ACAUUUUAGAACAUA
Stem-loop sequence UUUUAUCUUUUUAGGUCUGUCAAACCCUAAGGGUUUAAUCUCUCAUAGUCAUACAAGAUUUUACACUUGAAAAGGGGUUUAGAAACGGAUGGAAGAGAAGGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535554.3
ncRNA:24   AGGG-AAGAGAAGGUAGGCAAAGAU   1
  ||=|-||||||*||||*||||||||
targets:394   UCUCAUUCUCUCCCAUGCGUUUCUA   418

2.5 PREDICTED: Glycine max scarecrow-like protein 8 (LOC100797571), mRNA scarecrow-like protein 8(LOC100797571) coding protein psRNATarget