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BaseInfo

ncRNA ID	novel_gma_miR5811
Species	Glycine max
Class	miRNA
Genome position	Chr1:43812602-43812680 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835766
Length	21
Mature sequence(if miRNA)	59 - CACAAAAAAUACACAUAACAA - 79
Stem-loop(if miRNA)	--                          CA     UUA  A   GUUAUGUGUAUUUUUUGUGUAUCCUA  CUUUU   GC U   ||||||||||||||||||||||||||  |||||   ||   CAAUACACAUAAAAAACACAUAGGAU  GAAAA   UG U AA                          AC     ---  U
Stem-loop sequence	GUUAUGUGUAUUUUUUGUGUAUCCUACACUUUUUUAGCAUUUGUAAAAGCAUAGGAUACACAAAAAAUACACAUAACAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006591430.2	ncRNA:21   AACAAUACACAUAAAAAACAC   1   *||||=|*||||||||||||| targets:148   CUGUUGUUUGUAUUUUUUGUG   168 Target Full Sequence	2.0	PREDICTED: Glycine max lanC-like protein GCL1 (LOC100782771), transcript variant X6, mRNA	lanC-like protein GCL1(LOC100782771)	coding protein	psRNATarget
XM_006583103.2	ncRNA:21   AACAAUACACAUAAAAAACAC   1   ***||||*||||||||||||| targets:608   ACUUUAUUUGUAUUUUUUGUG   628 Target Full Sequence	2.0	PREDICTED: Glycine max probable nucleoside diphosphate kinase 5 (LOC100807618), mRNA	probable nucleoside diphosphate kinase 5(LOC100807618)	coding protein	psRNATarget
XM_006587607.2	ncRNA:21   AACAAUACACAUAAAAAACAC   1   |||||||*||||||||||*|| targets:3922   UUGUUAUAUGUAUUUUUUUUG   3942 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein MRL1, chloroplastic-like (LOC100788743), mRNA	pentatricopeptide repeat-containing protein MRL1, chloroplastic-like(LOC100788743)	coding protein	psRNATarget
XM_006592013.2	ncRNA:21   AACAAUACACAUAAAAAACAC   1   |||||=|*||||||||||||* targets:3873   UUGUUGUAUGUAUUUUUUGUC   3893 Target Full Sequence	3.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein MRL1, chloroplastic-like (LOC100814164), mRNA	pentatricopeptide repeat-containing protein MRL1, chloroplastic-like(LOC100814164)	coding protein	psRNATarget
XM_006606198.2	ncRNA:21   AACAAUACACAUAAAAAACAC   1   **|**|||||||||||||||| targets:3473   CGGCAAUGUGUAUUUUUUGUG   3493 Target Full Sequence	3.0	PREDICTED: Glycine max pumilio homolog 4-like (LOC100776550), transcript variant X2, mRNA	pumilio homolog 4-like(LOC100776550)	coding protein	psRNATarget
XM_006606199.2	ncRNA:21   AACAAUACACAUAAAAAACAC   1   **|**|||||||||||||||| targets:3454   CGGCAAUGUGUAUUUUUUGUG   3474 Target Full Sequence	3.0	PREDICTED: Glycine max pumilio homolog 4-like (LOC100776550), transcript variant X1, mRNA	pumilio homolog 4-like(LOC100776550)	coding protein	psRNATarget
XM_006606200.2	ncRNA:21   AACAAUACACAUAAAAAACAC   1   **|**|||||||||||||||| targets:3451   CGGCAAUGUGUAUUUUUUGUG   3471 Target Full Sequence	3.0	PREDICTED: Glycine max pumilio homolog 4-like (LOC100776550), transcript variant X3, mRNA	pumilio homolog 4-like(LOC100776550)	coding protein	psRNATarget
XM_003547619.3	ncRNA:21   AACAAUACACAUAAAAAACAC   1   ***||=*|||||||||||||| targets:3738   CGUUUGAGUGUAUUUUUUGUG   3758 Target Full Sequence	3.0	PREDICTED: Glycine max protein TPLATE-like (LOC100787122), mRNA	protein TPLATE-like(LOC100787122)	coding protein	psRNATarget