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BaseInfo

ncRNA ID novel_gma_miR5810
Species Glycine max
Class miRNA
Genome position Chr15:43229095-43229158 [-]
Reference genome Glycine_max_v2.0
Source SRR835766
Length 21
Mature sequence(if miRNA) 1 - AUGAAGAUUGAGCUCUCCUAA - 21
Stem-loop(if miRNA) --     UU      A   -  -C  -  CC A
  AGGGG  CUCAAU UUC UG  AG CU  C A
  |||||  |||||| ||| ||  || ||  | A
  UCCUC  GAGUUA AAG AC  UC GA  G A
AA     UC      G   U  CU  U  UA U
Stem-loop sequence AGGGGUUCUCAAUAUUCUGCAGCUCCCAAAAUGAUAGUCUUCCAUGAAGAUUGAGCUCUCCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006594302.2
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *||||||||||||||||||||
targets:2155   CUAGGAGAGCUCAAUCUUCAU   2175

0.0 PREDICTED: Glycine max putative disease resistance RPP13-like protein 1 (LOC100777280), transcript variant X2, mRNA putative disease resistance RPP13-like protein 1(LOC100777280) coding protein psRNATarget
XM_014765669.1
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *||||||||||||||||||||
targets:2155   CUAGGAGAGCUCAAUCUUCAU   2175

0.0 PREDICTED: Glycine max putative disease resistance RPP13-like protein 1 (LOC100777280), transcript variant X1, mRNA putative disease resistance RPP13-like protein 1(LOC100777280) coding protein psRNATarget
XM_003541532.3
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  ||||||||*||||||||||||
targets:2170   UUAGGAGAACUCAAUCUUCAU   2190

1.5 PREDICTED: Glycine max putative disease resistance RPP13-like protein 1 (LOC100778337), transcript variant X1, mRNA putative disease resistance RPP13-like protein 1(LOC100778337) coding protein psRNATarget
XM_014768062.1
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *||||||||||*|||||||||
targets:2032   CUAGGAGAGCUGAAUCUUCAU   2052

1.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100776964), transcript variant X2, mRNA putative disease resistance protein At3g14460(LOC100776964) coding protein psRNATarget
XM_006594322.2
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *|||||||*||||||||||||
targets:2215   CUAGGAGAACUCAAUCUUCAU   2235

1.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100783712), transcript variant X3, mRNA putative disease resistance protein At3g14460(LOC100783712) coding protein psRNATarget
FJ014885.1
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *|||||||*||||||||||||
targets:2119   CUAGGAGAACUCAAUCUUCAU   2139

1.5 Glycine max clone cw24 disease resistance protein mRNA, complete cds NA coding protein psRNATarget
NM_001250906.1
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *|||||||*||||||||||||
targets:2119   CUAGGAGAACUCAAUCUUCAU   2139

1.5 Glycine max disease resistance protein (LOC100499655), mRNA disease resistance protein(LOC100499655) coding protein psRNATarget
XM_006594323.2
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *|||||||*||||||||||||
targets:2188   CUAGGAGAACUCAAUCUUCAU   2208

1.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100783712), transcript variant X2, mRNA putative disease resistance protein At3g14460(LOC100783712) coding protein psRNATarget
XM_003541539.3
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *|||||||*||||||||||||
targets:2215   CUAGGAGAACUCAAUCUUCAU   2235

1.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100783712), transcript variant X1, mRNA putative disease resistance protein At3g14460(LOC100783712) coding protein psRNATarget
XM_014766257.1
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *|||||||*||||||||||||
targets:2280   CUAGGAGAACUCAAUCUUCAU   2300

1.5 PREDICTED: Glycine max putative disease resistance RPP13-like protein 1 (LOC102661203), mRNA putative disease resistance RPP13-like protein 1(LOC102661203) coding protein psRNATarget
XM_006598028.2
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *||||||||||*|||||||||
targets:2530   CUAGGAGAGCUGAAUCUUCAU   2550

1.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100776964), transcript variant X1, mRNA putative disease resistance protein At3g14460(LOC100776964) coding protein psRNATarget
XM_014765683.1
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *|||||||*||||||||||||
targets:2780   CUAGGAGAACUCAAUCUUCAU   2800

1.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC547607), mRNA putative disease resistance protein At3g14460(LOC547607) coding protein psRNATarget
XM_014767520.1
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *|||||||*||||||||||||
targets:3023   CUAGGAGAACUCAAUCUUCAU   3043

1.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100789590), mRNA putative disease resistance protein At3g14460(LOC100789590) coding protein psRNATarget
XM_006594297.2
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *|||||||*||||||||||||
targets:2339   CUAGGAGAACUCAAUCUUCAU   2359

1.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100818432), transcript variant X2, mRNA putative disease resistance protein At3g14460(LOC100818432) coding protein psRNATarget
XM_006594297.2
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *|||||||*||||||||||||
targets:5096   CUAGGAGAACUCAAUCUUCAU   5116

1.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100818432), transcript variant X2, mRNA putative disease resistance protein At3g14460(LOC100818432) coding protein psRNATarget
XM_006594296.2
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *|||||||*||||||||||||
targets:2339   CUAGGAGAACUCAAUCUUCAU   2359

1.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100818432), transcript variant X1, mRNA putative disease resistance protein At3g14460(LOC100818432) coding protein psRNATarget
XM_006594296.2
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *|||||||*||||||||||||
targets:5330   CUAGGAGAACUCAAUCUUCAU   5350

1.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100818432), transcript variant X1, mRNA putative disease resistance protein At3g14460(LOC100818432) coding protein psRNATarget
XM_014765646.1
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  |||||=||*||||||||||||
targets:2249   UUAGGGGAACUCAAUCUUCAU   2269

2.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100806158), transcript variant X2, mRNA putative disease resistance protein At3g14460(LOC100806158) coding protein psRNATarget
XM_014765645.1
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  |||||=||*||||||||||||
targets:2248   UUAGGGGAACUCAAUCUUCAU   2268

2.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100806158), transcript variant X1, mRNA putative disease resistance protein At3g14460(LOC100806158) coding protein psRNATarget
XM_014765661.1
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *||||=||*||||||||||||
targets:2143   CUAGGGGAACUCAAUCUUCAU   2163

2.5 PREDICTED: Glycine max putative disease resistance RPP13-like protein 1 (LOC100804921), mRNA putative disease resistance RPP13-like protein 1(LOC100804921) coding protein psRNATarget
XM_006594290.2
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  *||||=||*||||||||||||
targets:2193   CUAGGGGAACUCAAUCUUCAU   2213

2.5 PREDICTED: Glycine max putative disease resistance RPP13-like protein 1 (LOC100811488), mRNA putative disease resistance RPP13-like protein 1(LOC100811488) coding protein psRNATarget
XM_006598038.2
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  ||*||||||||||||||||*|
targets:2280   UUCGGAGAGCUCAAUCUUCUU   2300

2.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100792404), transcript variant X2, mRNA putative disease resistance protein At3g14460(LOC100792404) coding protein psRNATarget
XM_003545782.3
ncRNA:21   AAUCCUCUCGAGUUAGAAGUA   1
  ||*||||||||||||||||*|
targets:2315   UUCGGAGAGCUCAAUCUUCUU   2335

2.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100792404), transcript variant X1, mRNA putative disease resistance protein At3g14460(LOC100792404) coding protein psRNATarget
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