ncRNA ID | novel_gma_miR5807 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:1642733-1642857 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835766 |
Length | 24 |
Mature sequence(if miRNA) | 102 - AAGUUUGUUUGAUUGUUUGGUAAA - 125 |
Stem-loop(if miRNA) |
--    --                 CUAACCAAUG                            C   UAUC  ACAGUCAAAUAAACUUU          AAAAAAAAUUAGAAGCUGGUUGAAAUGU U   ||||  |||||||||||||||||          ||||||||||||||||||||||||||||   AUGG  UGUUAGUUUGUUUGAAA          UUUUUUUUAAUUUUUGACUAACUUUACA U AA    UU                 -AGUCGAUCA                            G |
Stem-loop sequence | UAUCACAGUCAAAUAAACUUUCUAACCAAUGAAAAAAAAUUAGAAGCUGGUUGAAAUGUCUUGACAUUUCAAUCAGUUUUUAAUUUUUUUUACUAGCUGAAAAGUUUGUUUGAUUGUUUGGUAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003531880.3 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC100812808 (LOC100812808), mRNA | uncharacterized LOC100812808(LOC100812808) | coding protein | psRNATarget | |||||||||
AK285298.1 |
|
1.0 | Glycine max cDNA, clone: GMFL01-06-P20 | NA | coding protein | psRNATarget | |||||||||
XM_006591565.1 |
|
2.5 | PREDICTED: Glycine max protein FAR1-RELATED SEQUENCE 5-like (LOC100795665), mRNA | protein FAR1-RELATED SEQUENCE 5-like(LOC100795665) | coding protein | psRNATarget |