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BaseInfo

ncRNA ID	novel_gma_miR5804
Species	Glycine max
Class	miRNA
Genome position	Chr14:38292173-38292280 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835766;SRR835767
Length	21
Mature sequence(if miRNA)	1 - UUACAAAGAAAAAUGGACCCA - 21
Stem-loop(if miRNA)	--    AAC              A     AUA               --U  AAA   GGUC   UUUUCUUUGUAAAU UUAGA   GGUUUUCUUUCUUUU   CC   A   ||||   |||||||||||||| |||||   |||||||||||||||   ||   U   CCAG   AAAAGAAACAUUUA AAUUU   CCAAAAGGAAGAAAA   GG   A AC    GUA              C     -AA               CCC  AAC
Stem-loop sequence	GGUCAACUUUUCUUUGUAAAUAUUAGAAUAGGUUUUCUUUCUUUUUCCAAAAUACAAGGCCCAAAAGAAGGAAAACCAAUUUAACAUUUACAAAGAAAAAUGGACCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014774309.1	ncRNA:21   ACCCAGGUAAAAAGAAACAUU   1   ***|*|||||||||||||||| targets:376   AUAGACCAUUUUUCUUUGUAA   396 Target Full Sequence	2.0	PREDICTED: Glycine max protein SHOOT GRAVITROPISM 6-like (LOC106798336), mRNA	protein SHOOT GRAVITROPISM 6-like(LOC106798336)	coding protein	psRNATarget
XM_006580400.2	ncRNA:21   ACCCAGGUAAAAAGAAACAUU   1   **|||==*||||||||||||| targets:2423   GUGGUUUUUUUUUCUUUGUAA   2443 Target Full Sequence	3.0	PREDICTED: Glycine max probable serine incorporator (LOC100781543), transcript variant X1, mRNA	probable serine incorporator(LOC100781543)	coding protein	psRNATarget
XM_014775884.1	ncRNA:21   ACCCAGGUAAAAAGAAACAUU   1   **|||==*||||||||||||| targets:2429   GUGGUUUUUUUUUCUUUGUAA   2449 Target Full Sequence	3.0	PREDICTED: Glycine max probable serine incorporator (LOC100781543), transcript variant X3, mRNA	probable serine incorporator(LOC100781543)	coding protein	psRNATarget
XM_014775885.1	ncRNA:21   ACCCAGGUAAAAAGAAACAUU   1   **|||==*||||||||||||| targets:2625   GUGGUUUUUUUUUCUUUGUAA   2645 Target Full Sequence	3.0	PREDICTED: Glycine max probable serine incorporator (LOC100781543), transcript variant X4, mRNA	probable serine incorporator(LOC100781543)	coding protein	psRNATarget
XM_003524340.3	ncRNA:21   ACCCAGGUAAAAAGAAACAUU   1   **|||==*||||||||||||| targets:2667   GUGGUUUUUUUUUCUUUGUAA   2687 Target Full Sequence	3.0	PREDICTED: Glycine max probable serine incorporator (LOC100781543), transcript variant X2, mRNA	probable serine incorporator(LOC100781543)	coding protein	psRNATarget
XM_003554364.3	ncRNA:21   ACCCAGGUAAAAAGAAACAUU   1   |**||=|*||||||||||||| targets:2533   UUAGUUCUUUUUUCUUUGUAA   2553 Target Full Sequence	3.0	PREDICTED: Glycine max leucine-rich repeat receptor-like protein kinase PXC1 (LOC100781702), mRNA	leucine-rich repeat receptor-like protein kinase PXC1(LOC100781702)	coding protein	psRNATarget