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BaseInfo

ncRNA ID	novel_gma_miR5796
Species	Glycine max
Class	miRNA
Genome position	Chr14:3882672-3882795 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835766;SRR1451610
Length	20
Mature sequence(if miRNA)	1 - CAGGUCAGGCUUUGAAAGGC - 20
Stem-loop(if miRNA)	--             --        U A   U    UAC      --       --   CUGAGCC   CAGGUCAGGCUUU  GAAAGGCC G GCC AGCC   GAUGAA  UCUUUGA  GGC       U   |||||||||||||  |||||||| | ||| ||||   ||||||  |||||||  |||   GUCCGGUCUGAAA  UUUUCUGG C CGG UCGG   UUAUUU  AGAAACU  CCG       G CG             AU        U -   C    -UU      UC       AU   AUAUCCG
Stem-loop sequence	CAGGUCAGGCUUUGAAAGGCCUGAGCCUAGCCUACGAUGAAUCUUUGAGGCCUGAGCCUGGCCUAUAGCCUAUCAAAGACUUUUAUUUUGGCUCGGCCUGGUCUUUUUAAAAGUCUGGCCUGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT093481.1	ncRNA:20   CGGAAAGUUUCGGACUGGAC   1   *||||*||||||*||||||| targets:485   ACCUUCCAAAGCGUGACCUG   504 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-24K19 unknown mRNA	NA	coding protein	psRNATarget
XM_014764261.1	ncRNA:20   CGGAAAGUUUCGGACUGGAC   1   *||||*||||||*||||||| targets:498   ACCUUCCAAAGCGUGACCUG   517 Target Full Sequence	2.5	PREDICTED: Glycine max lanC-like protein GCL1 (LOC100782771), transcript variant X1, mRNA	lanC-like protein GCL1(LOC100782771)	coding protein	psRNATarget
XM_006591429.2	ncRNA:20   CGGAAAGUUUCGGACUGGAC   1   *||||*||||||*||||||| targets:597   ACCUUCCAAAGCGUGACCUG   616 Target Full Sequence	2.5	PREDICTED: Glycine max lanC-like protein GCL1 (LOC100782771), transcript variant X3, mRNA	lanC-like protein GCL1(LOC100782771)	coding protein	psRNATarget
XM_014764262.1	ncRNA:20   CGGAAAGUUUCGGACUGGAC   1   *||||*||||||*||||||| targets:604   ACCUUCCAAAGCGUGACCUG   623 Target Full Sequence	2.5	PREDICTED: Glycine max lanC-like protein GCL1 (LOC100782771), transcript variant X4, mRNA	lanC-like protein GCL1(LOC100782771)	coding protein	psRNATarget
XM_006591428.2	ncRNA:20   CGGAAAGUUUCGGACUGGAC   1   *||||*||||||*||||||| targets:605   ACCUUCCAAAGCGUGACCUG   624 Target Full Sequence	2.5	PREDICTED: Glycine max lanC-like protein GCL1 (LOC100782771), transcript variant X2, mRNA	lanC-like protein GCL1(LOC100782771)	coding protein	psRNATarget
XM_003538558.3	ncRNA:20   CGGAAAGUUUCGGACUGGAC   1   *||||*||||||*||||||| targets:637   ACCUUCCAAAGCGUGACCUG   656 Target Full Sequence	2.5	PREDICTED: Glycine max lanC-like protein GCL1 (LOC100782771), transcript variant X5, mRNA	lanC-like protein GCL1(LOC100782771)	coding protein	psRNATarget