ncRNA ID | novel_gma_miR5785 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:43244424-43244557 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835766 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGAAUCAUAUGGAUCGUUGAU - 21 |
Stem-loop(if miRNA) |
--UAUU     U     G           - UA    A            AU   -  UUAAAAAAAA       GAUCC UAUGA UUAUAUGGAUU G  AUCC UAUGACUCAUAC  AUU AC          U       ||||| ||||| ||||||||||| |  |||| ||||||||||||  ||| ||       CUAGG AUACU AGUAUACCUAA C  UAGG AUACUGAGUAUG  UAA UG          U UAGUUG     U     A           C GC    C            GC   C  UUAAACAUAC |
Stem-loop sequence | UAUUGAUCCUUAUGAGUUAUAUGGAUUGUAAUCCAUAUGACUCAUACAUAUUACUUAAAAAAAAUUCAUACAAAUUGUCAAUCGGUAUGAGUCAUACGGAUCGCCAAUCCAUAUGAAUCAUAUGGAUCGUUGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006598935.2 |
|
1.0 | PREDICTED: Glycine max sialyltransferase-like protein 1 (LOC100800355), transcript variant X1, mRNA | sialyltransferase-like protein 1(LOC100800355) | coding protein | psRNATarget |