Search result

BaseInfo

ncRNA ID novel_gma_miR5785
Species Glycine max
Class miRNA
Genome position Chr9:43244424-43244557 [-]
Reference genome Glycine_max_v2.0
Source SRR835766
Length 21
Mature sequence(if miRNA) 1 - UGAAUCAUAUGGAUCGUUGAU - 21
Stem-loop(if miRNA) --UAUU     U     G           - UA    A            AU   -  UUAAAAAAAA
      GAUCC UAUGA UUAUAUGGAUU G  AUCC UAUGACUCAUAC  AUU AC          U
      ||||| ||||| ||||||||||| |  |||| ||||||||||||  ||| ||
      CUAGG AUACU AGUAUACCUAA C  UAGG AUACUGAGUAUG  UAA UG          U
UAGUUG     U     A           C GC    C            GC   C  UUAAACAUAC
Stem-loop sequence UAUUGAUCCUUAUGAGUUAUAUGGAUUGUAAUCCAUAUGACUCAUACAUAUUACUUAAAAAAAAUUCAUACAAAUUGUCAAUCGGUAUGAGUCAUACGGAUCGCCAAUCCAUAUGAAUCAUAUGGAUCGUUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006598935.2
ncRNA:21   UAGUUGCUAGGUAUACUAAGU   1
  *|||*||||||||||||||||
targets:1930   UUCAUCGAUCCAUAUGAUUCA   1950

1.0 PREDICTED: Glycine max sialyltransferase-like protein 1 (LOC100800355), transcript variant X1, mRNA sialyltransferase-like protein 1(LOC100800355) coding protein psRNATarget