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BaseInfo

ncRNA ID novel_gma_miR5783
Species Glycine max
Class miRNA
Genome position Chr8:11645352-11645439 [-]
Reference genome Glycine_max_v2.0
Source SRR1295517;SRR1451610;SRR1451612;SRR1451615
Length 22
Mature sequence(if miRNA) 1 - CAAGAAAAUGAAUGGUGAGGAU - 22
Stem-loop(if miRNA) --      AC                C        CUAACAACU
  CUUCAC  UUCAUUUUCUUGAAAU UAAUGGUU         A
  ||||||  |||||||||||||||| ||||||||
  GGAGUG  AAGUAAAAGAACUUUA AUUGCCAA         A
UA      GU                A        UUUCUAAUC
Stem-loop sequence CUUCACACUUCAUUUUCUUGAAAUCUAAUGGUUCUAACAACUAACUAAUCUUUAACCGUUAAAUUUCAAGAAAAUGAAUGGUGAGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003520509.3
ncRNA:22   UAGGAGUGGUAAGUAAAAGAAC   1
  |*||||||*||||||||||||*
targets:2365   AACCUCACAAUUCAUUUUCUUU   2386

2.0 PREDICTED: Glycine max isoamylase 2, chloroplastic-like (LOC100797949), mRNA isoamylase 2, chloroplastic-like(LOC100797949) coding protein psRNATarget
BT090117.1
ncRNA:22   UAGGA-GUGGUAAGUAAAAGAAC   1
  *||||-||||||||||||||||*
targets:89   UUCCUUCACCAUUCAUUUUCUUU   111

3.0 Soybean clone JCVI-FLGm-3N9 unknown mRNA NA coding protein psRNATarget
NM_001251455.2
ncRNA:22   UAGGA-GUGGUAAGUAAAAGAAC   1
  *||||-||||||||||||||||*
targets:87   UUCCUUCACCAUUCAUUUUCUUU   109

3.0 Glycine max response regulator ARR6-like (LOC100306152), mRNA uncharacterized LOC100306152(LOC100306152) coding protein psRNATarget