ncRNA ID | novel_gma_miR5783 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:11645352-11645439 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295517;SRR1451610;SRR1451612;SRR1451615 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CAAGAAAAUGAAUGGUGAGGAU - 22 |
Stem-loop(if miRNA) |
--      AC                C        CUAACAACU   CUUCAC  UUCAUUUUCUUGAAAU UAAUGGUU         A   ||||||  |||||||||||||||| ||||||||   GGAGUG  AAGUAAAAGAACUUUA AUUGCCAA         A UA      GU                A        UUUCUAAUC |
Stem-loop sequence | CUUCACACUUCAUUUUCUUGAAAUCUAAUGGUUCUAACAACUAACUAAUCUUUAACCGUUAAAUUUCAAGAAAAUGAAUGGUGAGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003520509.3 |
|
2.0 | PREDICTED: Glycine max isoamylase 2, chloroplastic-like (LOC100797949), mRNA | isoamylase 2, chloroplastic-like(LOC100797949) | coding protein | psRNATarget | |||||||||
BT090117.1 |
|
3.0 | Soybean clone JCVI-FLGm-3N9 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001251455.2 |
|
3.0 | Glycine max response regulator ARR6-like (LOC100306152), mRNA | uncharacterized LOC100306152(LOC100306152) | coding protein | psRNATarget |