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BaseInfo

ncRNA ID novel_gma_miR5771
Species Glycine max
Class miRNA
Genome position Chr7:21720929-21721103 [+]
Reference genome Glycine_max_v2.0
Source SRR835766;SRR835771
Length 24
Mature sequence(if miRNA) 152 - AUGACAGCGGAAUGAAGAAGGAAG - 175
Stem-loop(if miRNA) --       C          CA  C G  C               A                AUCC    ----CCUACA       CA
  UCCUUCU CAUUCCGCUG  AU G AC UCGAGAAGCAAAGGA UCCAUUGAUGAAGAAG    AAGG          AGCUCUA  U
  ||||||| ||||||||||  || | || ||||||||||||||| ||||||||||||||||    ||||          |||||||  G
  AGGAAGA GUAAGGCGAC  UA U UG AGUUCUUCGUUUCCU AGGUAACUACUUCUUC    UUCC          UCGAGGU  A
GA       A          AG  A G  A               G                CUUC    UAUAAACCGC       AU
Stem-loop sequence UCCUUCUCCAUUCCGCUGCAAUCGGACCUCGAGAAGCAAAGGAAUCCAUUGAUGAAGAAGAUCCAAGGCCUACAAGCUCUACAUGAUAUGGAGCUCGCCAAAUAUCCUUCUUCCUUCUUCAUCAAUGGAGUCCUUUGCUUCUUGAAGUGUAAUGACAGCGGAAUGAAGAAGGAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT095722.1
ncRNA:24   GAAGGAAGAAGUAAGGCGACAGUA   1
  |||||||||*||||||||||*|||
targets:37   CUUCCUUCUCCAUUCCGCUGCCAU   60

2.5 Soybean clone JCVI-FLGm-15I19 unknown mRNA NA coding protein psRNATarget