Search result

BaseInfo

ncRNA ID novel_gma_miR5770
Species Glycine max
Class miRNA
Genome position Chr8:3896602-3896709 [+]
Reference genome Glycine_max_v2.0
Source SRR835765
Length 21
Mature sequence(if miRNA) 88 - GUGCUCUCUAUACUUCUGUCA - 108
Stem-loop(if miRNA) --       -              U  -   U       ---------U  UAUAAUAU
  ACAGAAG AUAGAGAGCACAGA GA UGA AUGCAUA          UA        A
  ||||||| |||||||||||||| || ||| |||||||          ||        U
  UGUCUUC UAUCUCUCGUGUUU CU AUU UACGUGU          UC        A
AC       A              C  C   C       UAAGUAGUAC  AAGGGACG
Stem-loop sequence ACAGAAGAUAGAGAGCACAGAUGAUGAUAUGCAUAUUAUAUAAUAUAUAGCAGGGAACUCAUGAUGAAUUGUGCAUCUUACUCCUUUGUGCUCUCUAUACUUCUGUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774400.1
ncRNA:21   ACUGUCUUCAUAUCUCUCGUG   1
  |||||||=||||||||||||*
targets:3470   UGACAGAGGUAUAGAGAGCAA   3490

2.0 PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At2g16250 (LOC100805769), mRNA probable LRR receptor-like serine/threonine-protein kinase At2g16250(LOC100805769) coding protein psRNATarget