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BaseInfo

ncRNA ID	novel_gma_miR5765
Species	Glycine max
Class	miRNA
Genome position	Chr1:21819287-21819392 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835765
Length	23
Mature sequence(if miRNA)	84 - CUAAGACGGUUCUUUGAAAAAUC - 106
Stem-loop(if miRNA)	--           C  UG  A    A         CCUCUAUAUG      UAUU   CUAAGACGGUU UU  AA AAUC UCUUAGAAU          UUUUAA    U   ||||||||||| ||  || |||| |||||||||          ||||||   GAUUCUGCUAA AA  UU UUAG AGAAUCUUA          AAAAUU    U AA           A  GU  C    C         ----CUAAAA      UUUU
Stem-loop sequence	CUAAGACGGUUCUUUGAAAAAUCAUCUUAGAAUCCUCUAUAUGUUUUAAUAUUUUUUUUUUAAAAAAAAUCAUUCUAAGACGAUUCUUUGAAAAAUCGUCUUAGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014778868.1	ncRNA:23   CUAAAAAGUUUCUUGGCAGAAUC   1   ||**||*|||||||||||||||| targets:3146   GAACUUGCAAAGAACCGUCUUAG   3168 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100775370 (LOC100775370), transcript variant X6, mRNA	uncharacterized LOC100775370(LOC100775370)	coding protein	psRNATarget
XM_014778867.1	ncRNA:23   CUAAAAAGUUUCUUGGCAGAAUC   1   ||**||*|||||||||||||||| targets:3254   GAACUUGCAAAGAACCGUCUUAG   3276 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100775370 (LOC100775370), transcript variant X5, mRNA	uncharacterized LOC100775370(LOC100775370)	coding protein	psRNATarget
XM_006585080.2	ncRNA:23   CUAAAAAGUUUCUUGGCAGAAUC   1   ||**||*|||||||||||||||| targets:3271   GAACUUGCAAAGAACCGUCUUAG   3293 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100775370 (LOC100775370), transcript variant X4, mRNA	uncharacterized LOC100775370(LOC100775370)	coding protein	psRNATarget
XM_006585079.2	ncRNA:23   CUAAAAAGUUUCUUGGCAGAAUC   1   ||**||*|||||||||||||||| targets:3274   GAACUUGCAAAGAACCGUCUUAG   3296 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100775370 (LOC100775370), transcript variant X3, mRNA	uncharacterized LOC100775370(LOC100775370)	coding protein	psRNATarget
XM_014778866.1	ncRNA:23   CUAAAAAGUUUCUUGGCAGAAUC   1   ||**||*|||||||||||||||| targets:3278   GAACUUGCAAAGAACCGUCUUAG   3300 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100775370 (LOC100775370), transcript variant X2, mRNA	uncharacterized LOC100775370(LOC100775370)	coding protein	psRNATarget
XM_014778865.1	ncRNA:23   CUAAAAAGUUUCUUGGCAGAAUC   1   ||**||*|||||||||||||||| targets:3281   GAACUUGCAAAGAACCGUCUUAG   3303 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100775370 (LOC100775370), transcript variant X1, mRNA	uncharacterized LOC100775370(LOC100775370)	coding protein	psRNATarget
XM_014763138.1	ncRNA:23   CUAAAAAGUUUCUUGGCAGAAUC   1   *=|||||=|=||||||||||||| targets:1423   AGUUUUUUAGAGAACCGUCUUAG   1445 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA	uncharacterized LOC100806242(LOC100806242)	coding protein	psRNATarget
XM_006589010.2	ncRNA:23   CUAAAAAGUUUCUUGGCAGAAUC   1   *=|||||=|=||||||||||||| targets:2132   AGUUUUUUAGAGAACCGUCUUAG   2154 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA	uncharacterized LOC100806242(LOC100806242)	coding protein	psRNATarget
XM_006580077.2	ncRNA:23   CUAAAAAGUUUCUUGGCAGAAUC   1   ||**||*|||||=|||||||||| targets:2991   GAAGUUGCAAAGGACCGUCUUAG   3013 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100791123 (LOC100791123), transcript variant X2, mRNA	uncharacterized LOC100791123(LOC100791123)	coding protein	psRNATarget
XM_006580076.2	ncRNA:23   CUAAAAAGUUUCUUGGCAGAAUC   1   ||**||*|||||=|||||||||| targets:2995   GAAGUUGCAAAGGACCGUCUUAG   3017 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100791123 (LOC100791123), transcript variant X1, mRNA	uncharacterized LOC100791123(LOC100791123)	coding protein	psRNATarget