Search result

BaseInfo

ncRNA ID novel_gma_miR5762
Species Glycine max
Class miRNA
Genome position Chr6:22936771-22936850 [-]
Reference genome Glycine_max_v2.0
Source SRR835765
Length 21
Mature sequence(if miRNA) 60 - CUUAAAUGGAUUGGAUCUUGA - 80
Stem-loop(if miRNA) --                        ---CAAA      AA
  CUUAAAUGGAUUGGAUCUUGAAUC       GUGUUU  A
  ||||||||||||||||||||||||       ||||||  A
  GAAUUUACCUAACCUAGAAUUUAG       UAUAAA  A
AU                        AUAUAGG      AA
Stem-loop sequence CUUAAAUGGAUUGGAUCUUGAAUCCAAAGUGUUUAAAAAAAAAAUAUGGAUAUAGAUUUAAGAUCCAAUCCAUUUAAGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003549258.3
ncRNA:21   AGUUCUAGGUUAGGUAAAUUC   1
  **||||||||*|||||||||*
targets:2689   CAAAGAUCCAUUCCAUUUAAA   2709

2.5 PREDICTED: Glycine max uncharacterized LOC100816713 (LOC100816713), transcript variant X3, mRNA uncharacterized LOC100816713(LOC100816713) coding protein psRNATarget
XM_006601107.2
ncRNA:21   AGUUCUAGGUUAGGUAAAUUC   1
  **||||||||*|||||||||*
targets:2685   CAAAGAUCCAUUCCAUUUAAA   2705

2.5 PREDICTED: Glycine max uncharacterized LOC100816713 (LOC100816713), transcript variant X2, mRNA uncharacterized LOC100816713(LOC100816713) coding protein psRNATarget
XM_006601106.2
ncRNA:21   AGUUCUAGGUUAGGUAAAUUC   1
  **||||||||*|||||||||*
targets:2690   CAAAGAUCCAUUCCAUUUAAA   2710

2.5 PREDICTED: Glycine max uncharacterized LOC100816713 (LOC100816713), transcript variant X1, mRNA uncharacterized LOC100816713(LOC100816713) coding protein psRNATarget