ncRNA ID | novel_gma_miR5752 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:4766767-4766906 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835765 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGUUAUUUGAAAACUGAUGUCGUU - 24 |
Stem-loop(if miRNA) |
--                    C                                C            AA   GGUUAUUUGAAAACUGAUGU GUUAAGCACUUACAACAUCGGUUUUCAAGUAA CGAUGUUAAAAU  U   |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||   CUAAUAAACUUUUGGCUACA CAAUUCGUGAAUGUUGUAGCCAAAAGUUUAUU GCUACAAUUUUG  U AG                    A                                A            AC |
Stem-loop sequence | GGUUAUUUGAAAACUGAUGUCGUUAAGCACUUACAACAUCGGUUUUCAAGUAACCGAUGUUAAAAUAAUUCAGUUUUAACAUCGAUUAUUUGAAAACCGAUGUUGUAAGUGCUUAACAACAUCGGUUUUCAAAUAAUCGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014776578.1 |
|
0.0 | PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA | ankyrin repeat and SOCS box protein 7-like(LOC100786031) | coding protein | psRNATarget | |||||||||
BT097776.1 |
|
3.0 | Soybean clone JCVI-FLGm-26K14 unknown mRNA | NA | coding protein | psRNATarget |