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BaseInfo

ncRNA ID novel_gma_miR5752
Species Glycine max
Class miRNA
Genome position Chr19:4766767-4766906 [+]
Reference genome Glycine_max_v2.0
Source SRR835765
Length 24
Mature sequence(if miRNA) 1 - GGUUAUUUGAAAACUGAUGUCGUU - 24
Stem-loop(if miRNA) --                    C                                C            AA
  GGUUAUUUGAAAACUGAUGU GUUAAGCACUUACAACAUCGGUUUUCAAGUAA CGAUGUUAAAAU  U
  |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
  CUAAUAAACUUUUGGCUACA CAAUUCGUGAAUGUUGUAGCCAAAAGUUUAUU GCUACAAUUUUG  U
AG                    A                                A            AC
Stem-loop sequence GGUUAUUUGAAAACUGAUGUCGUUAAGCACUUACAACAUCGGUUUUCAAGUAACCGAUGUUAAAAUAAUUCAGUUUUAACAUCGAUUAUUUGAAAACCGAUGUUGUAAGUGCUUAACAACAUCGGUUUUCAAAUAAUCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776578.1
ncRNA:24   UUGCUGUAGUCAAAAGUUUAUUGG   1
  *||*||||||||||||||||||||
targets:1629   UACAACAUCAGUUUUCAAAUAACC   1652

0.0 PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA ankyrin repeat and SOCS box protein 7-like(LOC100786031) coding protein psRNATarget
BT097776.1
ncRNA:24   UUGCUGUAGUCAAAAGUUUAUUGG   1
  |=|*||**|||||||||||||||*
targets:984   AGCCACCACAGUUUUCAAAUAACA   1007

3.0 Soybean clone JCVI-FLGm-26K14 unknown mRNA NA coding protein psRNATarget