ncRNA ID | novel_gma_miR5749 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:43267293-43267374 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295517 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAUCAAGUUGACCCGUAAGUGACU - 24 |
Stem-loop(if miRNA) |
--           C         A   ---C GGAUCAACUUG   GAUCAAGUUGA CCGUAAGUG CUU    C           A   ||||||||||| ||||||||| |||    |   CUAGUUCAACU GGUAUUCAU GAA    G           U GC           A         -   CUAA CCUUCAAUGCC |
Stem-loop sequence | GAUCAAGUUGACCCGUAAGUGACUUCCGGAUCAACUUGAUCCGUAACUUCCGAAUCAAGUACUUAUGGAUCAACUUGAUCCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006600975.2 |
|
1.5 | PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA | basic leucine zipper 9-like(LOC100776831) | coding protein | psRNATarget | |||||||||
XM_014768353.1 |
|
2.5 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget |