Search result

BaseInfo

ncRNA ID novel_gma_miR5745
Species Glycine max
Class miRNA
Genome position Chr11:13770311-13770352 [+]
Reference genome Glycine_max_v2.0
Source SRR835765
Length 20
Mature sequence(if miRNA) 23 - UCAACUGCGGAAGAACCUUC - 42
Stem-loop(if miRNA) --ACC             AUA
     UUCUUCCGCAGUU   A
     |||||||||||||
     AAGAAGGCGUCAA   U
CUUCC             CUG
Stem-loop sequence ACCUUCUUCCGCAGUUAUAAUGUCAACUGCGGAAGAACCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003534027.3
ncRNA:20   CUUCCAAGAAGGCGUCAACU   1
  **|*|||||||||||||||*
targets:969   ACAUGUUCUUCCGCAGUUGC   988

3.0 PREDICTED: Glycine max uncharacterized LOC100820472 (LOC100820472), transcript variant X1, mRNA uncharacterized LOC100820472(LOC100820472) coding protein psRNATarget
XM_014762205.1
ncRNA:20   CUUCCAAGAAGGCGUCAACU   1
  **|*|||||||||||||||*
targets:1243   ACAUGUUCUUCCGCAGUUGC   1262

3.0 PREDICTED: Glycine max uncharacterized LOC100820472 (LOC100820472), transcript variant X2, mRNA uncharacterized LOC100820472(LOC100820472) coding protein psRNATarget