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BaseInfo

ncRNA ID	novel_gma_miR5743
Species	Glycine max
Class	miRNA
Genome position	Chr18:25200454-25200600 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835765
Length	24
Mature sequence(if miRNA)	1 - ACCACCACCACUGUGAUCGUUGUC - 24
Stem-loop(if miRNA)	--          -CU     C  UG            U   C                 CA UG   G  G  G   ACCACCACCA   GUGAU GU  UCAUGACCACUG CGU GCCACCAACAUGACUGU  U  UUG CA UG U   ||||||||||   ||||| ||  |||||||||||| ||| |||||||||||||||||  |  ||| || ||   UGGUGGUGGU   UACUA CA  AGUACUGGUGAC GUA CGGUGGUUGUACUGGCA  A  GAC GU GC G GU          UAG     A  GU            C   A                 AC GU   G  G  G
Stem-loop sequence	ACCACCACCACUGUGAUCGUUGUCAUGACCACUGUCGUCGCCACCAACAUGACUGUCAUUGUUGGCAGUGGUGGCGGUGGCAGUGACAACGGUCAUGUUGGUGGCAAUGCCAGUGGUCAUGAUGACAAUCAUGAUUGGUGGUGGUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014768087.1	ncRNA:24   CUGUUGCUAGUGUCACCACCACCA   1   |==|=||=|*=||||||||||||| targets:2344   GGUAGCGGUGGCAGUGGUGGUGGU   2367 Target Full Sequence	3.0	PREDICTED: Glycine max lateral signaling target protein 2 homolog (LOC100779988), transcript variant X1, mRNA	lateral signaling target protein 2 homolog(LOC100779988)	coding protein	psRNATarget
XM_003545913.3	ncRNA:24   CUGUUGCUAGUGUCACCACCACCA   1   |==|=||=|*=||||||||||||| targets:2343   GGUAGCGGUGGCAGUGGUGGUGGU   2366 Target Full Sequence	3.0	PREDICTED: Glycine max lateral signaling target protein 2 homolog (LOC100779988), transcript variant X2, mRNA	lateral signaling target protein 2 homolog(LOC100779988)	coding protein	psRNATarget
XM_003521482.3	ncRNA:24   CU--GUUGCUAGUGUCACCACCACCA   1   ||--||||*=|||||||||||||||* targets:1045   GAAUCAACCGUCACAGUGGUGGUGGC   1070 Target Full Sequence	3.0	PREDICTED: Glycine max protein NETWORKED 3A-like (LOC100815707), mRNA	protein NETWORKED 3A-like(LOC100815707)	coding protein	psRNATarget
XM_014763166.1	ncRNA:24   CU--GUUGCUAGUGUCACCACCACCA   1   ||--||||*=|||||||||||||||* targets:213   GAAUCAACAGUCACAGUGGUGGUGGC   238 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100527524 (LOC100527524), transcript variant X1, mRNA	uncharacterized LOC100527524(LOC100527524)	coding protein	psRNATarget
BT092371.1	ncRNA:24   CU--GUUGCUAGUGUCACCACCACCA   1   ||--||||*=|||||||||||||||* targets:28   GAAUCAACAGUCACAGUGGUGGUGGC   53 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-10D14 unknown mRNA	NA	coding protein	psRNATarget
NM_001250355.1	ncRNA:24   CU--GUUGCUAGUGUCACCACCACCA   1   ||--||||*=|||||||||||||||* targets:28   GAAUCAACAGUCACAGUGGUGGUGGC   53 Target Full Sequence	3.0	Glycine max uncharacterized LOC100527524 (LOC100527524), mRNA	uncharacterized LOC100527524(LOC100527524)	coding protein	psRNATarget
XM_014762902.1	ncRNA:24   CUGUUGCUAGUGUCACCACCACCA   1   **||||*|||=||||||||||||* targets:523   AUCAACCAUCGCAGUGGUGGUGGC   546 Target Full Sequence	3.0	PREDICTED: Glycine max protein NETWORKED 4B-like (LOC100798645), transcript variant X1, mRNA	protein NETWORKED 4B-like(LOC100798645)	coding protein	psRNATarget
XM_014762903.1	ncRNA:24   CUGUUGCUAGUGUCACCACCACCA   1   **||||*|||=||||||||||||* targets:76   AUCAACCAUCGCAGUGGUGGUGGC   99 Target Full Sequence	3.0	PREDICTED: Glycine max protein NETWORKED 4B-like (LOC100798645), transcript variant X2, mRNA	protein NETWORKED 4B-like(LOC100798645)	coding protein	psRNATarget
XM_014762508.1	ncRNA:24   CUGUUGCUAGUGUCACCACCACCA   1   |====||=|*=||||||||||||| targets:737   GGUGGCGGUAGCAGUGGUGGUGGU   760 Target Full Sequence	3.0	PREDICTED: Glycine max protein argonaute 2-like (LOC102659771), mRNA	protein argonaute 2-like(LOC102659771)	coding protein	psRNATarget
XM_003554449.3	ncRNA:24   CUGUUGCUAGUGUCACCACCACCA   1   **||||*=|||||||||||||||* targets:210   AUCAACCGUCACAGUGGUGGUGGC   233 Target Full Sequence	3.0	PREDICTED: Glycine max protein NETWORKED 3A-like (LOC100783309), transcript variant X1, mRNA	protein NETWORKED 3A-like(LOC100783309)	coding protein	psRNATarget
XM_014772073.1	ncRNA:24   CUGUUGCUAGUGUCACCACCACCA   1   **||||*=|||||||||||||||* targets:151   AUCAACCGUCACAGUGGUGGUGGC   174 Target Full Sequence	3.0	PREDICTED: Glycine max protein NETWORKED 3A-like (LOC100783309), transcript variant X2, mRNA	protein NETWORKED 3A-like(LOC100783309)	coding protein	psRNATarget
XM_003551609.3	ncRNA:24   CUGUUGCUAGUGUCACCACCACCA   1   ||*||*|||*=||||||||||||| targets:2827   GAAAAAGAUGGCAGUGGUGGUGGU   2850 Target Full Sequence	3.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g62910-like (LOC100777919), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At1g62910-like(LOC100777919)	coding protein	psRNATarget
XM_006605110.1	ncRNA:24   CUGUUGCUAGUGUCACCACCACCA   1   ||*||*|||*=||||||||||||| targets:458   GAAAAAGAUGGCAGUGGUGGUGGU   481 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC102661283 (LOC102661283), mRNA	uncharacterized LOC102661283(LOC102661283)	coding protein	psRNATarget
XM_006590976.2	ncRNA:24   CUG-----UUGCUAGUGUCACCACCACCA   1   |||-----||||=**|||||||||||||| targets:594   GACCGUUAAACGGAGACAGUGGUGGUGGU   622 Target Full Sequence	3.0	PREDICTED: Glycine max transcription factor UNE10-like (LOC100787929), mRNA	transcription factor UNE10-like(LOC100787929)	coding protein	psRNATarget